| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 7063 | 63 (0.910) | 33 (0.520) +GATT |
9/96 | NT | 50.6% | coding (897/1431 nt) | yaaJ | predicted transporter |
| ? | minE | = 1611756 | 7 (0.100) | coding (1397/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase | |||||
ATAAAAATGCCAATCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/7046‑7063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGATGT < minE/1611756‑1611688 |||| tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAAT > 1:1749416/3‑71tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAAT > 1:1726660/3‑71tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAA < 1:126384/68‑1tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCA < 1:753528/67‑1tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTT > 1:3858292/3‑64tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTG < 1:3395666/60‑1tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTAT < 1:4069272/41‑1tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTAT < 1:2491417/41‑1 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG > 1:3861818/1‑70 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAA > 1:1208299/1‑49 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAA > 1:3053369/1‑45 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAA > 1:3591233/1‑45 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATG > 1:718498/1‑42 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATG > 1:4051946/1‑42 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATG > 1:4045917/1‑42 AAAAATACCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAA > 1:529906/1‑49 AAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA > 1:3391011/1‑71 AAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA > 1:135832/1‑71 AAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGT > 1:1568067/1‑70 AAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA > 1:3470330/1‑70 AAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA > 1:3251224/1‑70 AAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATG > 1:559406/1‑40 AAATGCCAATCATAGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA > 1:3121805/1‑70 TGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA > 1:3292323/1‑67 TGCCAATCATCGATTCTTCCTGAGGGAACGACTTA > 1:711424/1‑35 TGCCAATCATCGATTCTTCCTGAGCGAACGACTTA > 1:2985947/1‑35 CAATCATCGATTCTTCCTGA‑GGAACGACTTATGAAACTAAAGA < 1:2972430/43‑1 AATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGC < 1:2940043/57‑1 AATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTT < 1:981709/53‑1 AATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTT < 1:559507/53‑1 ATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTT < 1:2157588/71‑1 ATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGT < 1:944491/51‑1 ATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGT < 1:3007008/51‑1 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGT < 1:3532054/60‑1 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAA < 1:1851717/39‑1 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAA < 1:3696969/39‑1 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAA < 1:3584132/39‑1 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAA < 1:642933/39‑1 CATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTT > 1:3957438/1‑69 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG > 1:550643/1‑71 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG > 1:2048575/1‑71 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG < 1:1131632/71‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTAT > 1:1958245/1‑60 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG < 1:653594/57‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGACAATGTATATCAGTTTAAG < 1:1127382/71‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCA < 1:2930450/42‑1 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGG < 1:1744330/71‑1 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGG < 1:3717084/71‑1 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGG < 1:88762/71‑1 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGG < 1:3440824/71‑1 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATAT < 1:2984747/61‑1 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCA < 1:304562/41‑1 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCA < 1:1352019/41‑1 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCA < 1:1619139/41‑1 CGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA > 1:1449650/1‑57 CGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA > 1:1977983/1‑57 CGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGA > 1:1273021/1‑37 CGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGA > 1:1061674/1‑37 GATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTT > 1:4037356/1‑46 GATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTT > 1:264621/1‑46 TCTTCCTGAGGGAACGACTTATGAGACTAAAGACCACAT < 1:820174/39‑1 TCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGATGT > 1:2106775/1‑70 TCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATAAGTTTAAGGATGT > 1:3195462/1‑70 TCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAA > 1:3531563/1‑49 TCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACAT < 1:212146/39‑1 TCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACAT < 1:1089911/39‑1 TCTTCCTGAGGCAACGACTTATGAAACTAAACAACACATTGat > 1:3816625/1‑41 |||| ATAAAAATGCCAATCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/7046‑7063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGATGT < minE/1611756‑1611688 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |