| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 18301 = | 81 (1.170) | 8 (0.120) | 4/102 | NT | 9.4% | intergenic (+140/+192) | nhaR/rpsT | DNA‑binding transcriptional activator/30S ribosomal subunit protein S20 |
| ? | minE | 18320 = | 74 (1.090) | intergenic (+159/+173) | nhaR/rpsT | DNA‑binding transcriptional activator/30S ribosomal subunit protein S20 | |||||
TATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCTTTT > minE/18254‑18386 | tATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAg > 1:1652791/1‑71 (MQ=255) tCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGcc > 1:1251070/1‑71 (MQ=255) tCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGcc < 1:3192351/71‑1 (MQ=255) acaATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGa > 1:3364906/1‑71 (MQ=255) tCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTc < 1:697747/71‑1 (MQ=255) atatTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTAc < 1:3226194/71‑1 (MQ=255) atTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATgg > 1:1102756/1‑63 (MQ=255) atTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTAc > 1:2524098/1‑69 (MQ=255) atTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGa > 1:2722235/1‑71 (MQ=255) atTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGa > 1:124233/1‑71 (MQ=255) ttCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTc < 1:2837186/65‑1 (MQ=255) ttCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGa < 1:1392965/70‑1 (MQ=255) ttCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGa < 1:721804/70‑1 (MQ=255) ttCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGAt > 1:865124/1‑71 (MQ=255) ttCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGAt > 1:2467022/1‑71 (MQ=255) ttCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGAt > 1:2290607/1‑71 (MQ=255) ttCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGAt > 1:2131678/1‑71 (MQ=255) tCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGAt > 1:3023939/1‑70 (MQ=255) tttGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATgg > 1:3952294/1‑59 (MQ=255) tttGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATgg > 1:2171565/1‑59 (MQ=255) tttGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATgg > 1:2021034/1‑59 (MQ=255) cttaagaatcgtagaaccatcggctgatATATTCTTGTTCAGAATGTAt > 1:843641‑M1/29‑49 (MQ=255) ttaagaatcgtagaaccatcggctgatATATTCTTGTTCAGAATGTAt > 1:830838‑M1/28‑48 (MQ=255) tgtgGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTc < 1:2704042/68‑1 (MQ=255) tgtgGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTc < 1:2077969/68‑1 (MQ=255) tgtgGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCtt < 1:1080785/70‑1 (MQ=255) taagaatcgtagaaccatcggctgatATATTCTTGTTCAGAATGTAt < 1:3433817‑M1/21‑1 (MQ=255) taagaatcgtagaaccatcggctgatATATTCTTGTTCAGAATGTATCa < 1:2337010‑M1/23‑1 (MQ=255) gtgGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCtt > 1:2174682/1‑69 (MQ=255) ggggAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTAc < 1:2714050/59‑1 (MQ=255) aGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGa < 1:3885165/71‑1 (MQ=255) aGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGa < 1:31315/71‑1 (MQ=255) aGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGa < 1:1879199/71‑1 (MQ=255) tCTGGAGATTGAGTAGATATTCTTGTTAAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGaa < 1:3910799/70‑1 (MQ=255) tGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAg > 1:2860955/1‑61 (MQ=255) tGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGaa < 1:3281000/68‑1 (MQ=255) tGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAagag > 1:2047793/1‑71 (MQ=255) ggAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGa < 1:1962210/41‑1 (MQ=255) ggAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGt > 1:1164321/1‑71 (MQ=255) gagaTTGAGTAGATATTCTTGTTCAGAATGTATCAGc > 1:1941947/1‑37 (MQ=255) gagaTTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGtt < 1:4064831/71‑1 (MQ=255) gagaTTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCATAAGCCACGAAGAGt < 1:2523140/70‑1 (MQ=255) agaTTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTc < 1:1961112/71‑1 (MQ=255) aTTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAg < 1:7242/71‑1 (MQ=255) ttGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGAt < 1:428921/48‑1 (MQ=255) ttGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGtt > 1:2381001/1‑67 (MQ=255) ttGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGa < 1:933918/71‑1 (MQ=255) ttGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGa < 1:738086/71‑1 (MQ=255) tGAGTAGATATTCTTGTTCAGAATTTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGa > 1:94643/1‑70 (MQ=255) tGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGa > 1:3523835/1‑46 (MQ=255) tGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGa > 1:1600282/1‑46 (MQ=255) tGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGa > 1:1310696/1‑70 (MQ=255) gAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAaga > 1:2142071/1‑62 (MQ=255) aGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAg < 1:1270862/71‑1 (MQ=255) tgatacattctgaacaagaatatATCAGCCGATGGTTCTACGATTCTTa < 1:2337010‑M2/26‑1 (MQ=255) gTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAg > 1:519376/1‑70 (MQ=255) gTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAg > 1:1496487/1‑70 (MQ=255) gTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGt < 1:1906213/71‑1 (MQ=255) gTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGt < 1:285540/71‑1 (MQ=255) gTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGt < 1:2041428/71‑1 (MQ=255) atacattctgaacaagaatatATCAGCCGATGGTTCTACGATTCTTaa > 1:830838‑M2/22‑48 (MQ=255) atacattctgaacaagaatatATCAGCCGATGGTTCTACGATTCTTa < 1:3433817‑M2/26‑1 (MQ=255) atacattctgaacaagaatatATCAGCCGATGGTTCTACGATTCTTAAg > 1:843641‑M2/22‑49 (MQ=255) aGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTa > 1:3877721/1‑70 (MQ=255) gATATTGTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTAc > 1:3237582/1‑70 (MQ=255) gATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTAc < 1:3279925/70‑1 (MQ=255) attctgaacaagaatgtATCAGCCGATGGTTCTACGATTCTTAAGCCa > 1:1646036‑M2/18‑48 (MQ=255) attctgaacaagaatgtATCAGCCGATGGTTCTACGATTCTTAAGCCa > 1:2716390‑M2/18‑48 (MQ=255) atTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACg > 1:643447/1‑71 (MQ=255) atTCTTGTTAAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATa > 1:1959166/1‑63 (MQ=255) tctgaacaagaatatATCAGCGGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGt > 1:2071970‑M2/16‑63 (MQ=255) tctgaacaagaatatATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGt > 1:100772‑M2/16‑63 (MQ=255) tCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACgg > 1:422399/1‑70 (MQ=255) tCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACgg > 1:3231996/1‑70 (MQ=255) cTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCa > 1:214400/1‑71 (MQ=255) cTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCa > 1:2335221/1‑71 (MQ=255) cTTGTTCAGAAAGTATCAGCCGATGGTACTACGATTCTTAAGCCCCGAAGAGTTCAGATAGTACaa > 1:2406769/1‑66 (MQ=255) ttGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCa < 1:834484/55‑1 (MQ=255) tGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGa > 1:2902666/1‑56 (MQ=255) tGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGa > 1:403442/1‑56 (MQ=255) gTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCAt < 1:1752845/69‑1 (MQ=255) gTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGt > 1:3763224/1‑71 (MQ=255) tCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGaa < 1:397002/44‑1 (MQ=255) cAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAaga > 1:3969714/1‑45 (MQ=255) cAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAaga > 1:1504404/1‑45 (MQ=255) cAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAaga > 1:669202/1‑45 (MQ=255) cAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAaga > 1:323888/1‑45 (MQ=255) aTGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGa > 1:1674296/1‑48 (MQ=255) aTGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCtttt < 1:3580494/71‑1 (MQ=255) aTGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCtttt < 1:1838617/71‑1 (MQ=255) aTGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCtttt < 1:3583483/71‑1 (MQ=255) aTGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCtttt < 1:3872270/71‑1 (MQ=255) tGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACaa > 1:309459/1‑55 (MQ=255) tGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACaa > 1:2742151/1‑55 (MQ=255) aTCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCAt > 1:653199/1‑58 (MQ=255) aTCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCAt > 1:3865994/1‑58 (MQ=255) aTCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCAt > 1:2481859/1‑58 (MQ=255) | TATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCTTTT > minE/18254‑18386 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |