| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 409805 = | 91 (1.320) | 4 (0.070) | 3/86 | NT | 5.6% | coding (2551/2583 nt) | leuS | leucyl‑tRNA synthetase |
| ? | minE | 409827 = | 59 (1.040) | coding (2529/2583 nt) | leuS | leucyl‑tRNA synthetase | |||||
Only 100 of 110 total aligned reads displayed.
CGCTTCCTCCCGCGCTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGAACCTGTTCTTC > minE/409758‑409892 | cGCTTCCTCCCGCGCTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAg > 1:2053861/1‑71 (MQ=255)cGCTTCCTCCCGCGCTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAg > 1:3150285/1‑71 (MQ=255)cGCTTCCTCCCGCGCTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAg > 1:2097814/1‑71 (MQ=255) gCTTCCTCCCGCGCTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGt < 1:2398627/71‑1 (MQ=255) gCTTCCTCCCGCGCTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGt < 1:2380836/71‑1 (MQ=255) gCTTCCTCCCGCGCTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGt < 1:318199/71‑1 (MQ=255) cTTCCTCCCGCGCTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAg > 1:1074101/1‑69 (MQ=255) ttCCTCCCGCGCTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACatt < 1:3425247/69‑3 (MQ=255) tcctccCGCGCTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTaa < 1:1706803/70‑1 (MQ=255) cctccCGCGCTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAAc < 1:4055668/70‑1 (MQ=255) ctccCGCGCTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGc > 1:3060432/1‑71 (MQ=255) tccCGCGCTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGt < 1:2463818/65‑1 (MQ=255) tccCGCGCTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGt < 1:1873854/65‑1 (MQ=255) gcgcTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCa < 1:328242/71‑1 (MQ=255) gcgcTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCa < 1:3442495/71‑1 (MQ=255) cgcTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATc > 1:33503/1‑69 (MQ=255) cgcTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATc > 1:22922/1‑69 (MQ=255) cgcTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATc > 1:1398518/1‑69 (MQ=255) gcTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGt < 1:1868480/59‑1 (MQ=255) gcTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAg < 1:2402466/71‑1 (MQ=255) aGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGatat > 1:2702791/1‑71 (MQ=255) aGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGatat > 1:2854707/1‑71 (MQ=255) aGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGata > 1:1929080/1‑70 (MQ=255) aGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATAACTTTACGTACAGTAACGCCATCAAGata < 1:1898704/70‑1 (MQ=255) gCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGatat < 1:3651133/70‑1 (MQ=255) gCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGatat < 1:2979156/70‑1 (MQ=255) gCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGa > 1:917896/1‑67 (MQ=255) gCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGa > 1:1581189/1‑67 (MQ=255) cAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATAtttt > 1:2111196/1‑71 (MQ=255) aCGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGc > 1:1490861/1‑71 (MQ=255) cGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGc > 1:1918425/1‑70 (MQ=255) cGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGc > 1:1286657/1‑70 (MQ=255) cGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGc > 1:2901901/1‑70 (MQ=255) cGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGc > 1:769128/1‑70 (MQ=255) cGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCt < 1:2638137/71‑1 (MQ=255) cGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCt < 1:3828501/71‑1 (MQ=255) gACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGat < 1:2984815/62‑1 (MQ=255) aGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAg < 1:1899235/71‑1 (MQ=255) aGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAg < 1:278298/71‑1 (MQ=255) aGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAg < 1:2512872/71‑1 (MQ=255) gATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATAttt > 1:3078064/1‑61 (MQ=255) aTTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGAt < 1:2206495/71‑1 (MQ=255) ttGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGAt < 1:2765806/70‑1 (MQ=255) gaggagTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGt < 1:3823649/70‑1 (MQ=255) gaggagTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGt < 1:3758082/70‑1 (MQ=255) aggagTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGtt < 1:1549781/70‑1 (MQ=255) aggagTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGtt < 1:2696848/70‑1 (MQ=255) aggagTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGtt < 1:1743161/70‑1 (MQ=255) ggagTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTcc < 1:1512995/71‑1 (MQ=255) gagTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCt > 1:1552866/1‑71 (MQ=255) gagTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCt > 1:727281/1‑71 (MQ=255) gagTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCt > 1:302345/1‑71 (MQ=255) gagTTTACCTGGTACGTAAATCACTTTACGTACAGTAACCCCATCAAGATATTTTGCTACCAGATGTTCCt > 1:137530/1‑71 (MQ=255) tttACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTc < 1:3066422/66‑1 (MQ=255) tttACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGc > 1:2504146/1‑71 (MQ=255) tttACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGc > 1:2445638/1‑71 (MQ=255) tttACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGc > 1:1893323/1‑71 (MQ=255) ttACCTGGTACGTAAATCACTTTACGTACAGTAACGCCAT‑AAGATATTTTGCTACCAGATGTTCCTGGcc < 1:2628059/70‑1 (MQ=255) tACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGc > 1:3759395/1‑69 (MQ=255) tACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGc > 1:3612286/1‑69 (MQ=255) tACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGc > 1:351036/1‑69 (MQ=255) tACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGc > 1:34026/1‑69 (MQ=255) tACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGc > 1:2264574/1‑69 (MQ=255) aCCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAg > 1:1294363/1‑71 (MQ=255) ccTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAg > 1:661271/1‑70 (MQ=255) cTGGTACGTAAATCTCTTTACGTAGAGTAACGCCATCAAGatat < 1:1729535/44‑1 (MQ=255) GTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACg > 1:447540‑M1/1‑70 (MQ=255) tacgtaaagtgatttacgtacAGTAACGCCATCAAGata < 1:2006735‑M2/18‑1 (MQ=255) TACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGa > 1:2057267‑M1/1‑52 (MQ=255) TACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGtt < 1:2206111‑M1/71‑1 (MQ=255) acgtaaagtgatttacgtacAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTc > 1:3826762‑M2/21‑71 (MQ=255) cgtaaagtgatttacgtacAGTAACGCCATCAAGATATTTTGc > 1:1466351‑M2/20‑43 (MQ=255) CGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTc > 1:3988945‑M1/1‑70 (MQ=255) GTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTcgc > 1:16164‑M1/1‑71 (MQ=255) AAATCACTTTACGTACAGTAACGCCATCAAGATAtt < 1:165516‑M1/36‑1 (MQ=255) AATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGaa < 1:1896286‑M1/71‑1 (MQ=255) AATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGaa < 1:2973011‑M1/71‑1 (MQ=255) AATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGa > 1:4102651‑M1/1‑70 (MQ=255) ATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGc > 1:474770‑M1/1‑59 (MQ=255) ATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGAAc < 1:133974‑M1/71‑1 (MQ=255) tCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGAAcc < 1:3880223/71‑1 (MQ=255) cACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGAACCt > 1:3459044/1‑71 (MQ=255) cACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGAACCt > 1:2360281/1‑71 (MQ=255) aCTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGc < 1:2492372/52‑1 (MQ=255) aCTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGc < 1:2158507/52‑1 (MQ=255) aCTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGAACCt < 1:1229341/70‑1 (MQ=255) aCTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGAACCt < 1:2749990/70‑1 (MQ=255) cTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGAACCTGt < 1:1549484/71‑1 (MQ=255) tttacgtacAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCa > 1:2658724‑M2/10‑52 (MQ=255) tttacgtacAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAg < 1:2483778‑M2/44‑1 (MQ=255) tttacgtacAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGAAcc < 1:1443913‑M2/58‑1 (MQ=255) tacgtacAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGAACCTGttct > 1:3526177‑M2/8‑71 (MQ=255) tacgtacAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGAACCTGttct > 1:2991260‑M2/8‑71 (MQ=255) acgtacAGTAACGCCATCAATATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGAACCTGttc < 1:2682076‑M2/63‑1 (MQ=255) acgtacAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGAACCTGttct < 1:2159920‑M2/64‑1 (MQ=255) acgtacAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGAACCTGtt < 1:1894925‑M2/62‑1 (MQ=255) cgtacAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGAACCTGttcttc < 1:359425‑M2/66‑1 (MQ=255) cgtacAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGAACCTGttctt < 1:3741987‑M2/65‑1 (MQ=255) cAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGAACCTGttc > 1:477837‑M2/2‑64 (MQ=255) cAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGAACCTGttc > 1:2924613‑M2/2‑64 (MQ=255) | CGCTTCCTCCCGCGCTTAGCCAACGACCAGATTGAGGAGTTTACCTGGTACGTAAATCACTTTACGTACAGTAACGCCATCAAGATATTTTGCTACCAGATGTTCCTGGCCAGCACGTTCGCGAACCTGTTCTTC > minE/409758‑409892 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |