| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1864319 = | 68 (1.140) | 25 (0.490) +TTGATGT |
7/84 | NT | 30.2% | intergenic (+66/+82) | ygcP/ygcQ | predicted anti‑terminator regulatory protein/predicted flavoprotein |
| ? | minE | 2870817 = | 67 (1.120) | intergenic (+60/‑120) | rnr/rlmB | exoribonuclease R, RNase R/23S rRNA (Gm2251)‑methyltransferase | |||||
Only 100 of 107 total aligned reads displayed.
TGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCA > minE/1864251‑1864388 | tGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAgcg > 1:379102/1‑70 (MQ=255) gACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGcc > 1:2208191/1‑71 (MQ=255) aCGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAgcgc < 1:1323396/69‑1 (MQ=255) aCGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGcc < 1:2395385/70‑1 (MQ=255) cGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCt > 1:2131225/1‑70 (MQ=255) cGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTg < 1:2720568/71‑1 (MQ=255) gATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATg > 1:3816702/1‑71 (MQ=255) aTAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGc < 1:1503762/71‑1 (MQ=255) aTAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGc > 1:3882628/1‑71 (MQ=255) tAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGc > 1:54139/1‑70 (MQ=255) gcctgatttagcgtgattttgtaggtcggataaggcgtttatgccgcatccgacatcaaCGCCTGATGCGa < 1:429367‑M1/12‑1 (MQ=255) gcctgatttagcgtgattttgtaggtcggataaggcgtttatgccgcatccgacatcaaCGCCTGATGCGa < 1:688005‑M1/12‑1 (MQ=255) aTCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGa < 1:978609/70‑1 (MQ=255) tCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACg > 1:4066871/1‑71 (MQ=255) tAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCtt < 1:2565089/71‑1 (MQ=255) tAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCtt > 1:3864475/1‑71 (MQ=255) tAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCtt < 1:2651683/71‑1 (MQ=255) tAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCtt < 1:1784597/71‑1 (MQ=255) tAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCtt < 1:2159235/71‑1 (MQ=255) atttagcgtgattttgtaggtcggataaggcgtttatgccgcatccgacatcaaCGCCTGATGCGACGCtt > 1:3757004‑M1/55‑71 (MQ=255) atttagcgtgattttgtaggtcggataaggcgtttatgccgcatccgacatcaaCGCCTGATGCGACGCtt > 1:1651814‑M1/55‑71 (MQ=255) atttagcgtgattttgtaggtcggataaggcgtttacgccgcatccgacatcaaTGCCTGATGCGACGCtt > 1:1748216‑M1/55‑71 (MQ=255) tttagcgtgattttgtaggtcggataaggcgtttatgccgcatccgacatcaaCGCCTGATGCGACGc < 1:2349645‑M1/15‑1 (MQ=255) tttagcgtgattttgtaggtcggataaggcgtttatgccgcatccgacatcaaCGCCTGATGCGACGc < 1:3022600‑M1/15‑1 (MQ=255) aaCCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTg > 1:3351106/1‑59 (MQ=255) aaCCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGcgccgcct > 1:3015323/1‑68 (MQ=255) aaCCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCtt > 1:1387128/1‑70 (MQ=255) aCCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGa > 1:3655392/1‑71 (MQ=255) cAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGAcg > 1:1812785/1‑71 (MQ=255) gcgtgattttgtaggtcggataaggcgtttatgccgcatccgacatcaaCGCCTGATGCGAcgcttaac > 1:2794429‑M1/50‑66 (MQ=255) aaTTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGAcgc < 1:3915297/71‑1 (MQ=255) aaTTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGAcgc > 1:889229/1‑71 (MQ=255) aaTTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGAcgc > 1:183237/1‑71 (MQ=255) aTTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGAcgcg > 1:3412795/1‑71 (MQ=255) ttGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCt > 1:2408349/1‑52 (MQ=255) ttGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCt < 1:291987/52‑1 (MQ=255) ttGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGAcgc < 1:1264782/69‑1 (MQ=255) ttGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGt > 1:2380230/1‑71 (MQ=255) ttGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGt < 1:3197546/71‑1 (MQ=255) gtgattttgtaggtcggataaggcgtttatgccgcatccgacatcaaCGCCTGATGCGACGCTTAACGCGt > 1:675455‑M1/48‑71 (MQ=255) tGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCt > 1:2941968/1‑51 (MQ=255) tGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTc > 1:244389/1‑71 (MQ=255) gattttgtaggtcggataaggcgtttatgccgcatccgacatcaaCGCCTGATGCGACg < 1:923694‑M1/14‑1 (MQ=255) gattttgtaggtcggataaggcgtttatgccgcatccgacatcaaCGCCTGATGCGACGCTTAACGCGTc > 1:2399343‑M1/46‑70 (MQ=255) gattttgtaggtcggataaggcgtttatgccgcatccgacatcaaCGCCTGATGCGACGCTTAACGCGTc < 1:3374261‑M1/25‑1 (MQ=255) gAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCt > 1:3083328/1‑71 (MQ=255) attttgtaggtcggataaggcgtttatgccgcatccgacatcaaCGCCTGATGCGACGCTTAACGCGTCt > 1:1847499‑M1/45‑70 (MQ=255) aaTTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCtt < 1:1233038/71‑1 (MQ=255) aTTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGAcgc > 1:736332/1‑65 (MQ=255) aTTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCtt < 1:3691480/70‑1 (MQ=255) aTTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTa < 1:3628077/71‑1 (MQ=255) tttGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGt > 1:3517401/1‑66 (MQ=255) tttGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTa > 1:2067448/1‑70 (MQ=255) tttGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTAt < 1:684465/71‑1 (MQ=255) tttGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTAt > 1:2289927/1‑71 (MQ=255) tttGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTAt > 1:3749855/1‑71 (MQ=255) ttgtaggtcggataaggcgtttatgccgcatccgacatcaaCGCCTGATGCGACGCTTAACGCGTCTTAt < 1:3291702‑M1/29‑1 (MQ=255) ttGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCg > 1:3043294/1‑52 (MQ=255) ttGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTc > 1:786558/1‑66 (MQ=255) ggTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGa > 1:3912345/1‑51 (MQ=255) ggTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGa < 1:266688/58‑1 (MQ=255) ggTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTAt > 1:921810/1‑68 (MQ=255) taggtcggataaggcgtttacgccgcatccgacatcaaTGCCTGATGCGACGCTTGCCGCGTCTTATCAg > 1:2123991‑M1/39‑70 (MQ=255) gTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAg < 1:783991/70‑1 (MQ=255) tttGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCtt < 1:3710124/54‑1 (MQ=255) tttGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTAt < 1:1006433/66‑1 (MQ=255) ttGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGAt > 1:2991764/1‑44 (MQ=255) ttGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCtt < 1:1834522/53‑1 (MQ=255) ttGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGcc > 1:3014361/1‑71 (MQ=255) ggtcggataaggcgtttatgccgcatccgacatcaaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGcc < 1:3522756‑M1/35‑1 (MQ=255) tGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGcc > 1:3030767/1‑70 (MQ=255) gtcggataaggcgtttacgccgcatccgacatcaaTGCCTGATGCGAc > 1:405859‑M1/36‑48 (MQ=255) cggataaggcgtttacgccgcatccgacatcaaCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc < 1:1276829‑M1/38‑1 (MQ=255) gataaggcgtttatgccgcatccgacatcaaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCtacgc > 1:3671455‑M1/32‑69 (MQ=255) ataaggcgtttatgccgcatccgacatcaaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCtacgc < 1:1943384‑M1/40‑3 (MQ=255) gTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAg > 1:1918647/1‑61 (MQ=255) tttacgccgcatccgacatcaaTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt > 1:2150327‑M1/23‑58 (MQ=255) tttacgccgcatccgacatcaaCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTacg > 1:654835‑M1/23‑60 (MQ=255) cACGCCACATCCGACATTCAGCGCCTGATGCGACGc < 1:4133127/36‑1 (MQ=255) tacgccgcaaccgacatcaaCGCCTGATGCGACGCTTGCCGCGTCt < 1:993478‑M1/26‑1 (MQ=255) ccACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAgag > 1:4143059/1‑49 (MQ=255) aTCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCg > 1:1853075/1‑71 (MQ=255) aTCCGACATTCAGCCCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTccc > 1:2534839/1‑58 (MQ=255) tCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCtt < 1:1604680/39‑1 (MQ=255) tCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCg > 1:2074387/1‑70 (MQ=255) tCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCg > 1:2816287/1‑70 (MQ=255) tccgacatcaaCGCCTGATGCGACGCTTAACGCGTCTTa > 1:1285918‑M1/12‑39 (MQ=255) ccGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTAt > 1:3093080/1‑40 (MQ=255) ccGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGa < 1:1149346/65‑1 (MQ=255) ccGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCg > 1:2861536/1‑69 (MQ=255) ccGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCg > 1:3902696/1‑69 (MQ=255) cGACATTCAGCGCCTGATGCGACGCTTGACGCGTCtt < 1:2069277/37‑1 (MQ=255) cGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAg > 1:2500803/1‑71 (MQ=255) gACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAgg > 1:3570257/1‑71 (MQ=255) aCATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAgg > 1:4106435/1‑70 (MQ=255) aTTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAg < 1:429319/71‑1 (MQ=255) ttCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAgg < 1:3127818/71‑1 (MQ=255) tCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGa > 1:647977/1‑71 (MQ=255) cAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGa < 1:2363599/70‑1 (MQ=255) gcgcCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGatca < 1:2094197/71‑1 (MQ=255) | TGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCA > minE/1864251‑1864388 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |