| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1474843 = | 22 (0.370) | 6 (0.130) +CGCTGCGATTT |
3/76 | NT | 20.0% | intergenic (+141/‑93) | nrdA/nrdB | ribonucleoside diphosphate reductase 1, alpha subunit/ribonucleoside diphosphate reductase 1, beta subunit, ferritin‑like |
| ? | minE | 2636227 = | 40 (0.670) | intergenic (+47/‑51) | ugpB/ugpA | glycerol‑3‑phosphate transporter subunit/glycerol‑3‑phosphate transporter subunit | |||||
TTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGTCATCATCCCGTCCGGT > minE/2636157‑2636297 | tttGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCgt > 1:4000975/1‑71 (MQ=255) tGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCgtg < 1:1190877/70‑1 (MQ=255) aaaTCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGc < 1:935903/71‑1 (MQ=255) tCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCgg < 1:2612147/71‑1 (MQ=255) tCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCg > 1:129163/1‑70 (MQ=255) gacgaAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGa < 1:1516273/70‑1 (MQ=255) gacgaAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGAt < 1:2589390/71‑1 (MQ=255) gaAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATaag < 1:992776/71‑1 (MQ=255) gTCTTAATCAGTGTAATGTCGGATGCGTTTGGCTTATCTGACCTGGCATCGCgtg > 1:2295454/1‑55 (MQ=255) gTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCgtg > 1:1005487/1‑55 (MQ=255) ttAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATaagcgaagc > 1:3296167/1‑71 (MQ=255) aaTCAGTGTAATGTCTGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATaagcgaagcg < 1:3124174/70‑1 (MQ=255) aaTCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATaagcgaagcg > 1:1163669/1‑70 (MQ=255) aTCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCa < 1:2250828/71‑1 (MQ=255) tCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATaagcgaag < 1:3863786/66‑1 (MQ=255) tCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATa < 1:2272277/59‑1 (MQ=255) tCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATa < 1:538463/59‑1 (MQ=255) aGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTa > 1:612197/1‑48 (MQ=255) tgtAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATaa < 1:2695412/56‑1 (MQ=255) tgtAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCgg < 1:395922/71‑1 (MQ=255) tgtAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCgg > 1:3463128/1‑71 (MQ=255) tgtAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATAGCgtg < 1:1313314/44‑1 (MQ=255) tgcgacgctgacgcgtcttatctggcctacacgctgcgatttTGTAGGCCGGATAAGCAAAGCGCATCCgg < 1:4128980‑M2/29‑1 (MQ=255) gtAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCgtg < 1:3365445/43‑1 (MQ=255) tAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTa > 1:710410/1‑44 (MQ=255) tAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAg < 1:3818050/45‑1 (MQ=255) aaTGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGca > 1:991318/1‑70 (MQ=255) acgctggcgcgtcttatcaggcctacacgctgcgatttTGTAGGCCGGATAAGCAAAGCGCATCCGGcac > 1:1885335‑M2/39‑70 (MQ=255) aTGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGca > 1:485565/1‑69 (MQ=255) cgctggcgcgtcttatcaggcctacgcgctgcgatttTGTAGGCCGGATAAGCAAAGCGCATCcggcattc < 1:1589403‑M2/34‑4 (MQ=255) cgctgacgcgtcttatctggcctacacgctgcgatttTGTAGGCCGGATAAGCAAAGCGCATCcggcattc < 1:3354877‑M2/34‑4 (MQ=255) ggcgcgtcttatcaggcctacacgctgcgatttTGTAgg < 1:3417370‑M2/6‑1 (MQ=255) ggATGCGTTTCGCTTATCTGACCTGGCATCGCGTTTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTc < 1:2520021/70‑1 (MQ=255) ggATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGtt > 1:1101664/1‑69 (MQ=255) aTGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAgg < 1:2099395/71‑1 (MQ=255) aTGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAgg < 1:1984582/71‑1 (MQ=255) gCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGaa > 1:3027534/1‑71 (MQ=255) cGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAAt > 1:725037/1‑71 (MQ=255) gTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAAt > 1:3301025/1‑70 (MQ=255) cttatcaggcctacacgctgcgatttTGTAGGCCGGATAAGCAAAGCGCATc < 1:833593‑M2/26‑1 (MQ=255) tCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCa > 1:891940/1‑62 (MQ=255) tCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAAc > 1:2792989/1‑71 (MQ=255) cGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAAc < 1:1802375/70‑1 (MQ=255) cGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAAc > 1:2344350/1‑70 (MQ=255) cTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGt < 1:3138519/71‑1 (MQ=255) cTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGt < 1:2015344/71‑1 (MQ=255) aTCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTa < 1:1145020/69‑1 (MQ=255) tCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAAt < 1:3098992/70‑1 (MQ=255) tGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAAtt > 1:2605514/1‑59 (MQ=255) tGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAAcc > 1:944229/1‑63 (MQ=255) tGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGt > 1:1400996/1‑70 (MQ=255) tGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAAtt < 1:4060665/54‑1 (MQ=255) gCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAgg < 1:2883788/48‑1 (MQ=255) gCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGTcatcat > 1:3699580/1‑69 (MQ=255) aTCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGaa > 1:554794/1‑48 (MQ=255) tCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGt < 1:1839870/55‑1 (MQ=255) tCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGtc < 1:1795755/61‑1 (MQ=255) tCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGTcatcat < 1:3554941/66‑1 (MQ=255) tCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGTCATCATCCCGt < 1:1643743/71‑1 (MQ=255) gcgTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGtc < 1:3808303/59‑1 (MQ=255) gcgTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGTCATCATCCCGTcc > 1:969385/1‑71 (MQ=255) gcgTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGTCATCATCCCGTcc > 1:995624/1‑71 (MQ=255) gcgTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGTCATCATCCCGTcc > 1:1014736/1‑71 (MQ=255) gcgTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGTCATCATCCCGTc < 1:3698302/70‑1 (MQ=255) gtgtAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGt > 1:392495/1‑56 (MQ=255) gtgtAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGTCATCATCCCGTCCgg > 1:347155/1‑71 (MQ=255) tgtAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGt < 1:473194/50‑1 (MQ=255) tgtAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGTCATCATCCCGTCCGgt > 1:3388270/1‑71 (MQ=255) | TTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGTCATCATCCCGTCCGGT > minE/2636157‑2636297 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |