Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ minE 22205 24946 2742 487 [0] [0] 54 [ileS]–ispH [ileS],lspA,fkpB,ispH

Only 100 of 487 total aligned reads displayed.

CGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTA  >  minE/22143‑22204
                                                             |
cGAAAGCTGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:719962/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCTTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:518533/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:592879/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:713428/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:703706/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:691223/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:684675/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:676760/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:660066/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:65044/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:645421/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:641217/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:608950/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:605263/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:46022/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:585862/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:571853/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:563205/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:553796/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:53623/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:512933/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:502812/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:484071/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:476974/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:1006913/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:831806/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:988397/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:963753/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:959066/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:95166/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:944171/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:934446/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:925618/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:915429/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:909734/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:901788/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:850085/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:725155/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:824882/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:817461/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:811509/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:799323/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:793070/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:789369/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:778278/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:759363/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:740622/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:726759/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:124638/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:238079/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:231686/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:220743/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:1031139/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:448811/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:185874/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:164781/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:151275/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:147221/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:135678/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:244050/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:1041995/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:1139430/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:1130233/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:1124061/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:1114821/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:1106020/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:1047513/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:1060231/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:107284/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:1082002/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:326590/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:439134/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:430077/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:415297/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:40916/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:402716/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:1003295/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:1013268/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:374742/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:34889/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:335965/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:318511/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:305256/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:295974/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:1020536/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:291752/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:279413/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:27282/62‑1 (MQ=255)
cGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:254999/62‑1 (MQ=255)
cGAAACCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:261736/62‑1 (MQ=255)
 gAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:19409/61‑1 (MQ=255)
 gAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:857344/61‑1 (MQ=255)
 gAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:19917/61‑1 (MQ=255)
 gAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:630233/61‑1 (MQ=255)
 gAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:382702/61‑1 (MQ=255)
 gAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:392877/61‑1 (MQ=255)
   aaGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:877223/59‑1 (MQ=255)
            aGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:117725/50‑1 (MQ=255)
                      ccTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:996785/40‑1 (MQ=255)
                         cAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTa  <  1:1100985/37‑1 (MQ=255)
                                                             |
CGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTA  >  minE/22143‑22204

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑