Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ minE 568215 570553 2339 145 [0] [0] 165 [hcr]–hcp [hcr],hcp

Only 100 of 145 total aligned reads displayed.

TCTGCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTCC  >  minE/568152‑568214
                                                              |
tCTGCTACTGGGGTG‑TGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:248465/62‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCTCGCCGAGCGCTTTCACTTcc  <  1:11060/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCTAGCGCTTTCACTTcc  <  1:164089/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:604133/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:711687/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:680164/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:678329/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:671636/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:665839/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:662730/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:650905/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:629394/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:624839/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:623599/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:619226/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:612146/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:722288/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:592335/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:569065/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:565369/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:562333/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:549744/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:544928/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:528705/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:526859/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:510108/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:102419/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:815674/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:942230/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:933116/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:925782/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:910826/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:901287/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:890967/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:882424/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:856342/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:835462/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:829389/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:825642/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:71925/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:802479/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:800856/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:778273/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:760496/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:760116/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:757769/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:746180/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:727961/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:726170/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:504849/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:232305/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:31899/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:318248/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:488479/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:315017/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:290011/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:269869/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:259820/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:251054/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:24891/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:236410/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:328027/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:224498/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:124088/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:223741/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:198276/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:197031/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:169671/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:160116/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:124858/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:144281/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:133700/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:40793/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:104764/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:472793/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:472527/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:455502/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:443976/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:441113/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:429006/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:428718/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:421554/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:408741/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:10675/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:394806/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:123121/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:37468/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:362930/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:361068/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:355642/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:347966/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:332353/60‑1 (MQ=255)
   gCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:328796/60‑1 (MQ=255)
    cTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:725303/59‑1 (MQ=255)
    cTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:859836/59‑1 (MQ=255)
    cTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:814194/59‑1 (MQ=255)
    cTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:388278/59‑1 (MQ=255)
    cTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:402521/59‑1 (MQ=255)
    cTACTGGGGTGAAGAATTCCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:484034/59‑1 (MQ=255)
     tACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTcc  <  1:900154/58‑1 (MQ=255)
                                                              |
TCTGCTACTGGGGTGAAGAATTTCTCTTTAAAGAAACGCGTCACGCCGAGCGCTTTCACTTCC  >  minE/568152‑568214

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑