Missing coverage evidence... | ||||||||||
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seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | minE | 895782 | 907982 | 12201 | 231 [1] | [0] 152 | [sapA]–[ycjT] | [sapA],ymjA,pspF,pspA,pspB,pspC,pspD,pspE,ycjM,ycjN,ycjO,ycjP,ycjQ,ycjR,ycjS,[ycjT] |
Only 100 of 231 total aligned reads displayed.
AGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAGGT > minE/895720‑895782 | aGTGGGAGTAAACCTGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:49739/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACTGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:675093/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGGACATCGCGACGCAGGTGGAAGCGATAgg > 1:794729/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:668681/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:756346/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:753082/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:748697/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:743503/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:735296/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:727790/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:72195/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:708735/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:70287/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:695520/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:766838/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:648498/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:631241/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:622282/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:618687/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:600527/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:592130/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:586902/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:577399/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:575394/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:575094/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:567875/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:856235/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:938722/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:930198/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:920787/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:910090/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:898677/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:885118/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:877284/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:872197/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:866988/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:863773/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:858531/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:563550/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:85043/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:84424/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:82811/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:825347/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:815412/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:811488/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:803174/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:796411/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:789853/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:783449/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:78151/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:2150/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:10/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:309671/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:29961/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:287697/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:277134/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:275999/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:262565/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:259270/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:242575/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:229955/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:225752/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:320097/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:206921/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:184613/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:17072/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:169643/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:161419/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:13886/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:135461/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:133643/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:127460/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:126148/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:108878/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:457860/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:55644/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:545070/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:542267/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:533335/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:525649/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:507202/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:491606/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:480734/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:47736/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:4728/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:468172/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:342637/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:446736/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:439954/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:432968/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:424182/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:417858/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:401994/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:383357/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:374517/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:364535/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:362280/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGAGATAgg > 1:248092/1‑62 (MQ=255) aGTGGGAGTAAACCAGTCGGGTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:199076/1‑62 (MQ=255) aGTGGGAGTAAACCAGTAGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAgg > 1:682327/1‑62 (MQ=255) | AGTGGGAGTAAACCAGTCGGTTTTTTGAAACGGAACATCGCGACGCAGGTGGAAGCGATAGGT > minE/895720‑895782 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |