Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ minE 1808998 1812674 3677 65 [1] [0] 8 [gshA]–[alaS] [gshA],yqaA,yqaB,argQ,argZ,argY,argV,serV,csrA,[alaS]

GCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCGC  >  minE/1808936‑1808998
                                                             | 
gCACTCGGTTTTCTCAAACGGCAGCGCCGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:185636/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCGTTGCAGGAAAGAAGAACAAATCg   >  1:530653/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:679407/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:704357/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:672406/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:668943/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:658311/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:652603/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:644524/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:642826/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:634022/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:633152/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:623708/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:60890/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:598470/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:573951/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:547208/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:680137/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:96338/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:721837/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:760809/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:807723/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:816854/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:832665/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:839557/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:846307/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:847950/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:875575/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:887441/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:912401/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:915940/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:920459/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:12227/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:36760/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:12801/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:138920/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:164433/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:171558/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:178218/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:191954/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:196834/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:208246/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:243678/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:245517/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:254497/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:31097/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:313248/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:320569/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:356215/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:539384/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:376426/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:38683/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:425443/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:427382/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:428071/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:438578/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:439426/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:447391/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:447476/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:472271/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:488020/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:488834/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:508837/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCg   >  1:522800/1‑62 (MQ=255)
gCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTCAGGAAAGAAGAACAAATCGc  >  1:554173/1‑62 (MQ=255)
                                                             | 
GCACTCGGTTTTCTCAAACGGCAGCGACGTTGGTTTTCCTTGCAGGAAAGAAGAACAAATCGC  >  minE/1808936‑1808998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: