Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2811524	2811578	55	69 [0]	[0] 43	uvrA	ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC

CAGCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGC  >  minE/2811462‑2811523                                                              | catcggcgTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1688108/59‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:528485/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1017828/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:182411/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1844013/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1876505/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:193751/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:202674/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:230172/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:239596/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:286472/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:38264/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:401509/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:440413/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:479127/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:482119/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1820757/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:604867/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:610991/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:624544/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:636103/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:650087/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:67645/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:679270/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:690582/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:779726/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:832544/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:886186/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:946034/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:976878/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:981008/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1097684/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1176546/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1209751/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1243034/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1282935/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:129686/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1328168/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1349204/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1174990/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1375360/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1385294/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1404190/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1127219/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1416609/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1485454/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1090143/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1519587/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1531370/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:106011/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1542876/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1598127/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1619957/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1664049/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1677603/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1029611/62‑1 (MQ=255) cagCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1678614/62‑1 (MQ=255) cagCGGCGAATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1709012/62‑1 (MQ=255)  agCGGCGTATTCTCGACATACACGTGGGGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:966681/61‑1 (MQ=255)  agCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1176460/61‑1 (MQ=255)  agCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:505905/61‑1 (MQ=255)  agCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1141961/61‑1 (MQ=255)  agCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:417899/61‑1 (MQ=255)  agCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:926676/61‑1 (MQ=255)  agCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1515021/61‑1 (MQ=255)  agCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:193915/61‑1 (MQ=255)  agCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1762801/61‑1 (MQ=255)  agCGGCGTATTCTCCACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:663327/61‑1 (MQ=255)                       tcGTGGCGGGCTTCCCGACGCAGACGCGTCCCTTCGCAGc  <  1:1440307/39‑1 (MQ=39)                                                              | CAGCGGCGTATTCTCGACATACACGTGGCGCGCTTCCCGACGCAGACGCGTCCCTTCGCAGC  >  minE/2811462‑2811523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑