Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2983953	2984134	182	53 [0]	[0] 20	creC	sensory histidine kinase in two‑component regulatory system with CreB or PhoB, regulator of the CreBC regulon

CGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAG  >  minE/2983892‑2983952                                                             | cgTATGCAGGCATTTGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:452080/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:539101/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1004676/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:227019/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:301501/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:379307/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:40792/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:414156/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:434414/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:505751/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:518935/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:529426/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:539100/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1899042/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:555581/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:59989/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:613894/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:623791/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:633544/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:674588/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:752271/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:844564/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:872410/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:904275/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:930833/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:939657/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1366368/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1027912/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1075877/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1095056/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1105580/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1147413/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1206028/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1232781/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1246044/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1263855/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1341913/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1347288/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1810101/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1415563/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1432887/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1442622/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1548995/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1605102/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1612550/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1646736/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1651914/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1728142/61‑1 (MQ=255) cgTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1767936/61‑1 (MQ=255)  gTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1104706/60‑1 (MQ=255)     tGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:65804/57‑1 (MQ=255)      gCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:1597001/56‑1 (MQ=255)                gTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAg  <  1:226551/46‑1 (MQ=255)                                                             | CGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAG  >  minE/2983892‑2983952

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑