Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	696484	696633	150	75 [0]	[0] 90	appB	cytochrome bd‑II oxidase, subunit II

CGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCAA  >  minE/696423‑696483                                                             | cGGCGTGCCTTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1111628/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:310323/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:54040/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:504152/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:483106/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:399220/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:398881/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:397004/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:394390/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:368986/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:333433/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:604385/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:290022/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:273035/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:261335/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:247621/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:23073/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:20844/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1006608/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:881659/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:976445/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:970881/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:939717/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:933496/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:919083/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:896347/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:894444/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:883987/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:560989/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:839895/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:776421/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:764375/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:694047/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:68785/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:667066/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:662130/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:19155/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1195970/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1859678/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1467069/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1456109/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:141356/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:12875/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1281868/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1271636/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1202884/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1474543/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1173844/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1171074/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1167364/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1127169/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1066285/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1033100/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1024797/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1015911/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1736207/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1854445/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:183748/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1797482/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1789499/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1780173/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1759228/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1746726/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1487529/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1713508/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1683798/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:165827/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1633760/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1624205/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1583229/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1544794/61‑1 (MQ=255) cGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:1496381/61‑1 (MQ=255)  ggCGTGCCGTTTTCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:755787/60‑1 (MQ=255)    cGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:289856/58‑1 (MQ=255)        ccGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCaa  <  1:899973/54‑1 (MQ=255)                                                             | CGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCAA  >  minE/696423‑696483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑