Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1215997	1216260	264	68 [0]	[0] 68	htpX	predicted endopeptidase

CCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAA  >  minE/1215939‑1215996                                                          | ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGaaaa  >  1:1857447/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:492752/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:520051/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:488778/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:360052/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:330691/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:303770/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:203997/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:189686/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1863147/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1836682/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1791208/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1775080/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:173899/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1733603/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1675611/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1010595/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1667741/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:521031/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:644155/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:69297/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:728498/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:730716/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:755035/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:785200/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:807482/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:807711/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:819062/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:8311/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:838325/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:885398/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:894650/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:919059/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1107222/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1336157/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1332842/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1229611/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1213638/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1204158/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:113161/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1116058/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1112219/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1352242/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1081421/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:107845/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1068973/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1068641/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1064/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1047441/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1030165/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1494321/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:164302/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1629119/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1623532/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1597627/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1594619/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1573889/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1562966/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1497486/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:165056/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1485457/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1465402/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1464862/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1458828/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1411838/1‑58 (MQ=255) ccTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:1406244/1‑58 (MQ=255) ccTTCATCACGATTAACGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:505575/1‑58 (MQ=255) cattCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGaaa  >  1:22688/3‑58 (MQ=255)                                                          | CCTTCATCACGATTTCCGCCCATAAAACCCGCGGCAAGCTGCGCCAGAATACGGGAAA  >  minE/1215939‑1215996

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑