Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1391311	1391406	96	38 [0]	[0] 149	fruA	fused fructose‑specific PTS enzyme IIB'BC components

CCAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATC  >  minE/1391249‑1391310                                                              | ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:610408/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1019498/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1695207/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1815508/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1831558/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:279072/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:339962/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:461734/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:501511/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:585966/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1694922/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:651546/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:735855/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:828807/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:842343/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:875093/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:918628/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:925796/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:978119/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1416184/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:104129/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1045744/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1076964/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1091403/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1139333/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1155773/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1256048/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1359891/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1409840/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1679351/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1428896/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1501109/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1525174/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1604102/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1616986/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1625956/62‑1 (MQ=255) ccAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:1656919/62‑1 (MQ=255)             tAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATc  <  1:481124/50‑1 (MQ=255)                                                              | CCAATACCGGCGTAATAGCGCCAGGGATCAGCAGAACAAACAGACCACCGTGCGGTGCCATC  >  minE/1391249‑1391310

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑