Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1418441	1419444	1004	99 [0]	[0] 82	[narP]–[ccmH]	[narP],[ccmH]

GACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCTT  >  minE/1418379‑1418440                                                              | gACAGCGACCCTGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:462417/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGTAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1451967/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGTAGCAAAGTCtt  <  1:1028968/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:615324/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:179589/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:595202/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:561003/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:521375/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:514342/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:510641/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:496104/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:48175/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:451022/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:396425/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:351340/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:297466/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:263877/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:233506/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:207233/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1874313/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1874147/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1855489/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1849213/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1832252/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:969349/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:744200/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1027056/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:911256/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:890692/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:878469/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:863372/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:855177/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:809325/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:80756/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:788310/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:779521/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:766930/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:621514/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:739980/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:732193/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:730801/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:72328/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:722611/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:705576/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:704493/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:679273/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:667578/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:623100/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1312719/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1461855/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:174490/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1393108/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:138971/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1374370/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1356035/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1353360/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1351435/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1351170/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1343706/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1330336/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1403306/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1279111/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1274825/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1193515/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1167328/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1153601/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1107234/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1105320/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1090499/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1071101/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1045453/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1029681/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:156218/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1690234/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1654371/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1613468/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1613057/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1609705/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1693374/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1589530/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1695924/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1582971/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:169939/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1517647/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1494301/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1712883/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:147414/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1494065/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1492747/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1491219/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1485695/62‑1 (MQ=255) gACAGCGACCCGGAAGTATTGCTGGAAGCGATTCCTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:684132/62‑1 (MQ=255) caCAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1825498/61‑1 (MQ=255)  aCAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1135706/61‑1 (MQ=255)  aCAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:1276750/61‑1 (MQ=255)  aCAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:39801/61‑1 (MQ=255)   cAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:488562/60‑1 (MQ=255)               aGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:70235/48‑1 (MQ=255)                 tATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCtt  <  1:383428/46‑1 (MQ=255)                                                              | GACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCTT  >  minE/1418379‑1418440

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑