Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1642558	1642585	28	19 [0]	[0] 87	ypfJ	conserved hypothetical protein

ACCGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCTT  >  minE/1642496‑1642557                                                              | aCCGACTTCATGGGCGATAACGTACCGCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCtt  <  1:1178581/62‑1 (MQ=255) aCCGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCtt  <  1:1511574/62‑1 (MQ=255) aCCGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCtt  <  1:720868/62‑1 (MQ=255) aCCGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCtt  <  1:1855330/62‑1 (MQ=255) aCCGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCtt  <  1:1764729/62‑1 (MQ=255) aCCGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCtt  <  1:1636852/62‑1 (MQ=255) aCCGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCtt  <  1:1574175/62‑1 (MQ=255) aCCGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCtt  <  1:1566196/62‑1 (MQ=255) aCCGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCtt  <  1:1557926/62‑1 (MQ=255) aCCGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCtt  <  1:1534429/62‑1 (MQ=255) aCCGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCtt  <  1:1017445/62‑1 (MQ=255) aCCGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCtt  <  1:14736/62‑1 (MQ=255) aCCGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCtt  <  1:1434318/62‑1 (MQ=255) aCCGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCtt  <  1:1431928/62‑1 (MQ=255) aCCGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCtt  <  1:1389772/62‑1 (MQ=255) aCCGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCtt  <  1:1228164/62‑1 (MQ=255) aCCGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCtt  <  1:1130027/62‑1 (MQ=255) aCCGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCtt  <  1:1032454/62‑1 (MQ=255)  ccGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCtt  <  1:659260/61‑1 (MQ=255)                                                              | ACCGACTTCATGGGCGATAACGTACCCCTGGGCAAAATCGCCATCCGCGCCAAGTTTGTCTT  >  minE/1642496‑1642557

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑