Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1963642	1963664	23	73 [0]	[0] 46	yggD	predicted DNA‑binding transcriptional regulator

AACGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGC  >  minE/1963580‑1963641                                                              | aaCGCGCCTCTGCCCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1887424/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAGTCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1080136/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTTACGCGTCATAGAGc  >  1:1051282/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:307436/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:475220/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:461880/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:45011/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:429341/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:423367/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:398208/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:376842/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:317882/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:308634/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:517493/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:300492/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:276435/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:242508/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:189602/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1891791/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1883584/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:688904/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:886430/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:884555/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:883560/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:851090/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:849594/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:820883/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:753475/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:723548/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:490369/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:664632/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:628067/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:621404/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:596880/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:554778/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:533173/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:184358/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1270314/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:186876/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:153920/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1529384/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1470775/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1437278/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1419747/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1338258/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1280825/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:155439/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1242641/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1222027/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1162201/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1150108/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:113709/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1053756/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1028916/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1025803/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1768309/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1019244/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1823501/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1822285/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1804177/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1801674/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1795018/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1586730/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1720317/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1701720/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1682559/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1638613/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1636455/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:162499/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1620384/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGc  >  1:1587011/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGAGTCATAGAGc  >  1:1108614/1‑62 (MQ=255) aaCGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAAAGCGTCATAGAGc  >  1:214122/1‑62 (MQ=255)                                                              | AACGCGCCTCTGACCAGACGGAGAAATCAGCGAACTTCATCGCTTTTAACGCGTCATAGAGC  >  minE/1963580‑1963641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑