Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2003760	2004096	337	44 [0]	[0] 13	[hybD]–[hybC]	[hybD],[hybC]

CCAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCGGCCAGG  >  minE/2003698‑2003759                                                              | ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:568928/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:249731/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:288924/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:1070495/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:349049/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:350893/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:372378/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:424291/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:472717/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:542418/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:340645/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:608099/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:635846/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:782242/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:789341/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:791503/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:911643/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:975984/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:978911/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:1870215/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:1089145/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:1094838/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:1158185/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:1173736/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:1233541/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:1398584/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:1468997/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:1486438/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:1549813/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:1554991/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:1661795/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:169653/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:1707451/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:1786375/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:179140/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:1793082/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:190516/62‑1 (MQ=255) ccAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGGCggccagg  <  1:1141869/62‑1 (MQ=255)  cAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:620857/61‑1 (MQ=255)  cAGGGGCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:459179/61‑1 (MQ=255)           cTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:558907/52‑1 (MQ=255)                      aCTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:774251/41‑1 (MQ=255)                            cGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:518012/35‑1 (MQ=255)                            cGGTGAAGCGCAGGGCCGACAAGACGTCggccagg  <  1:608102/35‑1 (MQ=255)                                                              | CCAGGGTCAGCTTTTTCGGAAACTCGCCGGTGAAGCGCAGGGCCGACAAGACGTCGGCCAGG  >  minE/2003698‑2003759

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑