Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ minE 2005699 2006089 391 55 [0] [0] 144 [hybC]–[hybB] [hybC],[hybB]

CACATGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCG  >  minE/2005637‑2005698
                                                             |
cacaTGGTACCGTAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1838765/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:249217/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1693759/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1716763/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1720251/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1048995/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1742926/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:957146/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:892155/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1852734/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1885123/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:734231/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1659868/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:300107/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:308004/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:417870/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:431644/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:4461/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:475311/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:716929/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:547066/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:603522/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:638751/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:684570/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1265244/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:998321/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1080113/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1081142/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1097482/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:114043/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1181614/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1187396/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1187903/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1192468/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1197190/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1248248/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:129197/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1294769/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1377745/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1389019/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1416587/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1524173/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1533291/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1538037/62‑1 (MQ=255)
cacaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1640743/62‑1 (MQ=255)
 acaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:173870/61‑1 (MQ=255)
 acaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:996993/61‑1 (MQ=255)
 acaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:498152/61‑1 (MQ=255)
 acaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:20383/61‑1 (MQ=255)
 acaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1792112/61‑1 (MQ=255)
 acaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1754699/61‑1 (MQ=255)
 acaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1367675/61‑1 (MQ=255)
 acaTGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:1065601/61‑1 (MQ=255)
                  cATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:713199/44‑1 (MQ=255)
                   aagCTATCGAAACGACGCCATTTTCGATTTCGCAATCGATGCg  <  1:983366/41‑1 (MQ=39)
                                                             |
CACATGGTACCGGAAGCCCATGCTTTCGAAACGACGCCATTTTCGATTTCGCAATCGATGCG  >  minE/2005637‑2005698

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: