Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2008913	2009209	297	68 [0]	[0] 128	[hybO]	[hybO]

GCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTG  >  minE/2008853‑2008912                                                            | gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:343671/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:178855/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:179819/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1833774/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1007097/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:185562/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:212685/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:214223/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:220395/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:227776/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:230737/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:257872/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:28871/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:303098/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:343086/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1841093/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:399073/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:435785/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:470699/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:491267/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:491902/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:56457/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:589207/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:62195/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:628900/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:639657/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:780506/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:810660/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:882183/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:930693/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:11888/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1031251/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1031542/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1037616/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1046017/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1048845/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1051271/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1059715/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1061308/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1133642/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1187881/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:178645/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1189699/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1215897/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1224650/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1551121/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1785980/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1776122/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1681879/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1680514/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1247003/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1428089/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1392332/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1363754/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1355327/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:133823/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:127244/60‑1 (MQ=255) gcgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCAATCTCTg  <  1:1169305/60‑1 (MQ=255) gcgcgcCAATCCAAATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:774284/60‑1 (MQ=255)  cgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:516079/59‑1 (MQ=255)  cgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:583934/59‑1 (MQ=255)  cgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:773920/59‑1 (MQ=255)  cgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:778350/59‑1 (MQ=255)  cgcgcCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1769970/59‑1 (MQ=255)            cAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:1607701/49‑1 (MQ=255)             aGATAACTGGCGGACGCTGCGGGTTAGTAACCTATTCGGCCATCTCTg  <  1:429854/48‑1 (MQ=255)                 aaCTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:629197/44‑1 (MQ=255)                    tGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTg  <  1:860447/41‑1 (MQ=255)                                                            | GCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTG  >  minE/2008853‑2008912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑