Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2577498	2577507	10	40 [0]	[0] 16	treF	cytoplasmic trehalase

GGCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAGG  >  minE/2577438‑2577497                                                            | ggatCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:843271/4‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGTTGTGACCGTAGTTTTCGATCATCCAgg  >  1:1423955/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1897337/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1854064/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:193335/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:201735/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:235060/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:270908/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:297191/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:336467/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:398990/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:400717/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:481096/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:504242/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:530982/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:573253/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:719563/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:736063/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:756874/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:780893/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:869164/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1435259/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1034445/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1035522/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:104578/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1196544/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1218602/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1239390/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1264517/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1337040/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1413156/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1020482/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1457331/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1462455/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1478485/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1521786/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1627800/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1670726/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1694356/1‑60 (MQ=255) ggCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAgg  >  1:1701999/1‑60 (MQ=255)                                                            | GGCTCAAATAATAGGTGCGGTTGCCGTTGGGGATGTGACCGTAGTTTTCGATCATCCAGG  >  minE/2577438‑2577497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑