Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	247524	247604	81	25 [0]	[1] 7	phoR	sensory histidine kinase in two‑component regulatory system with PhoB

CTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGATT  >  minE/247462‑247523                                                              | cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:1861872/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:928466/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:896159/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:753408/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:720401/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:604556/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:572088/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:32931/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:2792/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:253471/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:239192/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:1077826/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:1681431/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:1652894/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:1644701/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:154245/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:1444354/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:1425596/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:137411/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:1277987/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:1167264/62‑1 (MQ=255) cTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:1100043/62‑1 (MQ=255)  tGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:821622/61‑1 (MQ=255)                       ttGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:316158/40‑1 (MQ=255)                       ttGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGAtt  <  1:1218773/40‑1 (MQ=255)                                                              | CTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGATT  >  minE/247462‑247523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑