Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2908079	2908168	90	18 [0]	[0] 81	treR	DNA‑binding transcriptional repressor

CGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACA  >  minE/2908169‑2908230 |                                                              cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCGGCGATGACTGCCAGTGGGCTAACa  >  1:1120166/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGc               >  1:1893629/1‑49 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCa             >  1:1347955/1‑51 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCa             >  1:28782/1‑51 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCATTGGGCTAACa  >  1:639984/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAAc   >  1:605122/1‑61 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAAc   >  1:737661/1‑61 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAAc   >  1:716655/1‑61 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAAc   >  1:1776428/1‑61 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:451058/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:587017/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:447708/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:41162/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:379912/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:350907/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:323721/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:314081/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:302320/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:28850/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:229847/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:216302/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:214062/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:212930/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:209068/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:679086/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:989144/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:934322/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:916946/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:90185/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:797959/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:756611/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:720345/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:705205/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:478065/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:670244/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:666949/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:640736/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:62970/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:618635/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:187224/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:568425/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:567637/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1186390/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1397635/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1342473/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1296610/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1273951/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1259726/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1239374/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1237668/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1230767/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1229370/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1004833/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1180030/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1178194/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1173951/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1155094/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1106992/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1102645/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1070659/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1024483/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1554570/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1874363/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1849505/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1848545/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1837200/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1813237/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1813092/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1804989/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1800947/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1784599/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1763979/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1754126/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1693653/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1656978/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1643910/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:1593308/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:157031/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACa  >  1:153996/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATCACTGCCAGTGGGCTAACa  >  1:355843/1‑62 (MQ=255) cGAAGCAAAGCCTTTTGCGACACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAAc   >  1:1021181/1‑61 (MQ=255) |                                                              CGAAGCAAAGCCTTTTGCGTCACGCGCCAGCAGAACCAGCGATGACTGCCAGTGGGCTAACA  >  minE/2908169‑2908230

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑