Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	568642	568971	330	43 [0]	[0] 96	[hcr]–[hcp]	[hcr],[hcp]

CGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCG  >  minE/568972‑569012 |                                         cGGGCCGGTGACGATATTTTTCATGCCCAGAGAAAGCAGCg  <  1:762358/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCTCAGAGAAAGCAGCg  <  1:1622855/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:434599/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:591299/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:539438/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:530387/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:520584/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:509334/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:506521/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:473502/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:45721/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:454962/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:451050/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:614551/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:396356/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:367910/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:359399/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:351124/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:325064/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:321450/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:305056/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:285226/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:285020/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:274366/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:211254/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:78507/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:997193/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:984083/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:982647/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:9627/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:914497/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:912121/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:867848/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:835436/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:826779/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:790814/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:78700/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:596263/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:770895/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:715429/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:711723/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:706187/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:699337/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:682640/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:622088/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:620960/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:617606/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:616899/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:192650/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1312433/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1551199/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1539655/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1529378/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1476762/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1468632/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1457959/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1443260/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1411255/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1334302/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1317661/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1315198/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1554471/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1298460/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1268040/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:126340/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1263070/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1212762/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1180522/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1178174/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1158492/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1137637/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1126709/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1078992/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1684467/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1890854/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1822311/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1813829/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1803015/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1796667/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1796500/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1785522/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1724594/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1710021/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1708373/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1704749/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1078061/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1671635/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1654286/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1647810/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1646350/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1622364/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1586033/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:158300/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1567883/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCg  <  1:1567301/41‑1 (MQ=255) cGGGCCGGTGACGATATTTTTCACGCC‑‑GAGAAAGCAGCg  <  1:1611766/39‑1 (MQ=25) |                                         CGGGCCGGTGACGATATTTTTCACGCCCAGAGAAAGCAGCG  >  minE/568972‑569012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑