Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ minE 594937 594975 39 2 [0] [0] 117 ycaJ recombination protein

Only 100 of 117 total aligned reads displayed.

TCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGTT  >  minE/594976‑595037
|                                                             
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTcgcc                            >  1:1521255/1‑36 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTcgc                             >  1:978178/1‑35 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCtttt               >  1:565321/1‑49 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGaa     >  1:277496/1‑59 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGaa     >  1:1162740/1‑59 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:488246/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:650225/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:642232/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:637260/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:619168/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:606766/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:603979/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:590901/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:568686/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:556395/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:537814/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:515273/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:679272/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:470697/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:436348/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:350572/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:339651/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:337945/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:316152/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:296918/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:27167/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:26371/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:820691/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:991680/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:977479/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:960826/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:960506/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:930923/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:91735/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:905709/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:879978/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:869826/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:860441/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:850103/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:665285/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:779519/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:775284/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:767124/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:747950/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:740077/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:73085/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:72895/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:728887/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:724302/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:685737/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:258242/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1261891/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1498287/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1493992/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1422874/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1415089/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1413862/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:138680/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1385295/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1318483/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1296539/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1294736/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1286893/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1507055/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1258479/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1208117/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1178345/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1168119/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1162118/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1152735/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1151751/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1102559/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1092936/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1087552/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1058362/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1707720/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:207758/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:190251/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1880242/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1865551/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1839405/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1833797/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1812992/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1796821/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1750857/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1742379/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:173003/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1051262/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1700260/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1690750/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1659810/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1619921/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1619143/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1593276/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1590965/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1561750/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1540821/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:1533154/1‑62 (MQ=255)
tCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTAGACGAAGtt  >  1:1095568/1‑62 (MQ=255)
tCGAGCGCGCCAGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGtt  >  1:659566/1‑62 (MQ=255)
|                                                             
TCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGTT  >  minE/594976‑595037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑