Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1016206	1016382	177	125 [0]	[1] 43	[manA]	[manA]

GGATGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCA  >  minE/1016376‑1016437        |                                                       atctGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:858208/59‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATTTCGTTTCa  <  1:521032/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:589754/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:306586/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:354968/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:364237/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:385550/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:403088/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:479650/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:489772/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:542230/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:580721/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:243806/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:597830/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:689447/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:700689/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:711765/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:745802/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:787311/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:95287/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:963909/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:992969/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:1564455/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:1155598/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:1189743/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:1314314/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:1326477/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:1410917/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:1440830/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:1444846/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:1479712/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:1497500/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:152685/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:1023444/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:1610588/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:1616246/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:1622803/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:1774686/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:1805649/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:1837257/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:186436/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:197973/55‑1 (MQ=255)        cgcACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCa  <  1:205040/55‑1 (MQ=255)        |                                                       GGATGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCA  >  minE/1016376‑1016437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑