Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1393986	1394574	589	129 [0]	[0] 77	fruB	fused fructose‑specific PTS enzyme IIA component and HPr component

CTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATACC  >  minE/1394575‑1394636 |                                                              cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGa                            >  1:26353/1‑36 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGAt                           >  1:1875589/1‑37 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGAt                           >  1:1649558/1‑37 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGAt                           >  1:620325/1‑37 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCTAGCTGGCAGCAATAcc  >  1:723835/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGa                 >  1:633352/1‑47 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCt              >  1:531551/1‑50 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:447063/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:498837/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:419396/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:3737/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:295086/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:286878/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:27064/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:264647/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:256793/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:220257/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:213063/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1887802/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1834353/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1014205/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:628883/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:985607/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:945828/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:899304/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:885336/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:86253/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:694710/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:669727/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:633548/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:470643/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:615347/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:560767/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:548972/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:537848/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:523102/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1826728/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:494519/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1221213/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1821324/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1444123/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1425954/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1411172/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:139614/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1372665/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1286260/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1262877/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:145041/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1148/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1127344/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1119119/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1112280/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1070193/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1065883/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1045064/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1035611/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1579874/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1814432/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1812099/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1771951/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1761867/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1756291/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1666824/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1642731/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:163898/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1458683/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1575891/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1533115/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1526990/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1516062/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAcc  >  1:1515751/1‑62 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAc   >  1:1551021/1‑61 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAc   >  1:1364997/1‑61 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAc   >  1:33769/1‑61 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAc   >  1:1069254/1‑61 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATAc   >  1:435168/1‑61 (MQ=255) cTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCAGAGCTGGCAGCAATAcc  >  1:781229/1‑62 (MQ=255) |                                                              CTCAGTACGTGGGTCAGCTGGCGTAGCAGGCCCAGATGTTCATCCGAGCTGGCAGCAATACC  >  minE/1394575‑1394636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑