Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1550134	1550431	298	27 [0]	[0] 42	[vacJ]	[vacJ]

TTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTC  >  minE/1550432‑1550492 |                                                             ttCTATAGAAACAGAAAAAGGCAAACGCATCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:985422/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:341678/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:333499/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:363712/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:557125/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:610158/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:62526/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:633844/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:638618/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:678397/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:717155/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:761306/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:764397/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:795282/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:831946/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:840930/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:875900/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:879826/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:891763/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:898443/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:944145/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:148560/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:1031730/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:1039689/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:1106141/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:111453/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:1124045/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:1158080/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:1180570/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:1401685/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:1411499/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:148036/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:1008477/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:1533082/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:1660716/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:1672888/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:1705765/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:1741479/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:1745038/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:1791889/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:1854270/61‑1 (MQ=255) ttCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTc  <  1:263976/61‑1 (MQ=255) |                                                             TTCTATAGAAACAGAAAAAGGCAAACGCAGCCTTTTCTACATTTTCAGAGTAACTCCCGTC  >  minE/1550432‑1550492

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑