Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1634146	1634188	43	38 [0]	[0] 66	acrD	aminoglycoside/multidrug efflux system

CCAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTG  >  minE/1634189‑1634249 |                                                             ccAGCTTCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:190727/1‑61 (MQ=255) ccAGCTGCATTCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:851816/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGGGAAAGTTACCGCAGGCGGTGCAAAATCAGCGCGTGACGGTg  >  1:228058/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGTGGTGCAAAATCAGGGCGTGACGGTg  >  1:1443909/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGc           >  1:1195288/1‑52 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGt   >  1:1404024/1‑60 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGt   >  1:1404036/1‑60 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:401791/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:634854/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:629439/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:564829/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:560908/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:52220/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:497180/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:475307/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:691900/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:372187/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:351995/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:332258/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:317059/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:29194/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:636474/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:667689/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:995321/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:697594/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:783062/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:807403/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:80820/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:81958/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:827985/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:874323/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:894057/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:950990/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:955618/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:976208/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1064946/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1584004/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:106937/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1070418/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1081545/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1090809/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1174092/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1241400/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1270046/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1325072/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1332901/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1350768/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1413721/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1450359/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1467823/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1559010/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:285112/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:166224/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1665019/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1685553/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1711839/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1725365/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1730750/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1743848/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1748181/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1775662/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1838515/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1843835/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1846649/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:1867372/1‑61 (MQ=255) ccAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTg  >  1:273988/1‑61 (MQ=255) |                                                             CCAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTG  >  minE/1634189‑1634249

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑