Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1679564	1679576	13	63 [0]	[0] 97	pbpC	fused transglycosylase and transpeptidase

CAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGAC  >  minE/1679577‑1679638 |                                                              cAACGCGCGCCAGAGCTGGCGAGTTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1369842/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCaaa                            >  1:574921/1‑36 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGttt                       >  1:1039078/1‑41 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGtt                        >  1:914792/1‑40 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGt                         >  1:1396545/1‑39 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCa     >  1:414637/1‑59 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCa     >  1:288336/1‑59 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCa     >  1:1569409/1‑59 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1722664/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:326655/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:324151/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:312592/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:307634/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:293563/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:25284/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:249209/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:226602/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:393909/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1891733/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1853708/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1829685/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1826080/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1809874/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1795449/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1778816/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1762169/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:176200/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:571521/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:957290/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:878475/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:73920/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:732740/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:725074/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:712352/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:688175/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:68741/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:582119/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:578188/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:375974/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:555456/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:489635/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:484475/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:463565/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:445914/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:431808/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:421452/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:395450/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1028631/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:383094/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1177011/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1335227/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1319575/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1291813/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1288035/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1269226/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1267410/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1266123/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1264947/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1214334/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1192768/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1192714/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1707124/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1160669/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1151177/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1138327/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1133091/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1131826/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1113456/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:108134/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1072675/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1062382/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1000133/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1360834/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1716285/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1683575/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1676129/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1674631/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1671374/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1667023/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1637407/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1589168/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1581000/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1576197/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1531964/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1529907/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1484074/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1478242/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1430818/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1429804/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1398153/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1375997/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1358697/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGAc  >  1:349837/1‑62 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTTTGCAGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:961050/1‑60 (MQ=255) cAACGCGCGCCAGAGCTGGCGAATTATGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1037864/1‑60 (MQ=255) cAACGCGCCCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:1690593/1‑60 (MQ=255) cAACGCGAGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAg    >  1:969364/1‑60 (MQ=255) |                                                              CAACGCGCGCCAGAGCTGGCGAATTTTGCCGCCAAATGTTTTGGGGTGAGGATCAAGCAGAC  >  minE/1679577‑1679638

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑