Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1829029	1829100	72	44 [0]	[1] 40	mutS	methyl‑directed mismatch repair protein

GCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCC  >  minE/1829100‑1829159  |                                                           gCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:864618/60‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:600736/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1777554/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1827258/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1855993/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1868709/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:252348/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:303371/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:345289/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:461371/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:507098/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1683531/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:688459/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:759904/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:76077/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:775049/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:791404/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:854919/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:899873/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:955116/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1263385/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1037552/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1074441/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1097571/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1109289/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1205790/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1236528/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1239296/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1261618/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1032570/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1290767/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1371318/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1479114/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1484484/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1544901/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1546381/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1572402/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1621961/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGcc  <  1:1660780/59‑1 (MQ=255)  ccAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGGGAGCTGGAAAGCATTTCGcc  <  1:108455/59‑1 (MQ=255)  |                                                           GCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCC  >  minE/1829100‑1829159

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑