Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2258218	2258254	37	18 [0]	[0] 38	rpoB	RNA polymerase, beta subunit

TCTTCAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATTTCT  >  minE/2258255‑2258296 |                                          tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:603377/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1880995/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:217056/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:310371/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:344373/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:435916/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:463356/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:470210/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:56608/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:594302/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1815036/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:647483/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:736116/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:743132/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:762352/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:807850/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:828258/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:920470/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:942319/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1452133/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1071113/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1076457/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1157001/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1205055/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1283767/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1340732/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1371720/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1381671/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1382305/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1051324/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1456075/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1463681/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1482256/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1536628/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1627998/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1650353/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATttct  >  1:1772120/1‑42 (MQ=255) tcttcAGACAGGTCTTTCTTCGCCTCTTTGAGCTGCATttct  >  1:1472619/1‑42 (MQ=255) |                                          TCTTCAGACAGGTCTTTCTTCGCCTGTTTGAGCTGCATTTCT  >  minE/2258255‑2258296

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑