Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2348796	2349211	416	2 [1]	[0] 83	[polA]	[polA]

CTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAC  >  minE/2349212‑2349248 |                                     cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCAtata   >  1:432155/1‑36 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCAtata   >  1:41551/1‑36 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCAtata   >  1:92497/1‑36 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCAtata   >  1:1277742/1‑36 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCAtata   >  1:132448/1‑36 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCAtata   >  1:328203/1‑36 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCAtata   >  1:564466/1‑36 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCAtata   >  1:783430/1‑36 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCAtata   >  1:214765/1‑36 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:676134/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:722445/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:620812/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:577626/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:572874/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:561538/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:525383/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:523806/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:499369/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:49560/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:483194/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:479519/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:45787/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:448403/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:437516/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:860108/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:988471/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:974455/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:957703/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:937587/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:923726/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:919731/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:880242/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:860883/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:860271/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:681891/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:855896/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:833867/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:821121/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:777726/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:753088/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:751343/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:739920/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:403710/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:713806/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1380427/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1646663/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1624614/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1559129/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:155803/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:151336/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1509054/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1502879/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1502234/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1385749/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1700773/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1366112/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1330824/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1278888/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1236221/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1212302/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1212149/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1149234/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1123671/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:191498/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:38975/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:333255/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:294510/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:292542/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:265116/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:261947/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:261053/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:203373/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1091722/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1890539/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:184985/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1846147/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1810842/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1806566/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1779129/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1710078/1‑37 (MQ=255) cTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:1707433/1‑37 (MQ=255) cTGCTCTTTCGCCT‑AGCACGGGTGCGTTCCATATAc  >  1:952153/1‑36 (MQ=38) cTGCACTTTCGCCTGAGCACGGGTGCGTTCCATATAc  >  1:713526/1‑37 (MQ=255) |                                     CTGCTCTTTCGCCTGAGCACGGGTGCGTTCCATATAC  >  minE/2349212‑2349248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑