Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2495281	2495558	278	6 [0]	[0] 81	emrD	multidrug efflux system protein

TGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGC  >  minE/2495559‑2495607 |                                                 tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGc       >  1:1724003/1‑44 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTc     >  1:802427/1‑46 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCa    >  1:993773/1‑47 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAg   >  1:1337335/1‑48 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAg   >  1:1424648/1‑48 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:447384/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:601522/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:583699/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:580081/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:579694/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:557818/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:478130/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:46547/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:247468/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:459051/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:254348/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:23766/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:43505/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:424638/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:380251/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:310886/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:2965/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:268884/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:824690/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:989573/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:982244/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:960058/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:954807/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:948734/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:929527/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:908103/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:834300/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:650671/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:822167/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:82006/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:797424/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:749235/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:743434/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:685231/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:68470/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:677467/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1406250/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1069615/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1533351/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1515357/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1509308/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1486974/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:146933/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1462928/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1450011/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1449002/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1550007/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1399246/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1355557/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1306932/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1303426/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1255721/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1253700/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1168625/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1164593/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1095013/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1718164/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:229993/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:21443/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:213025/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:210681/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:208644/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1898826/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:183894/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1564834/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1714294/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1704415/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1669109/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:165685/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1638079/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1615130/1‑49 (MQ=255) tGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1593457/1‑49 (MQ=255) tGCCGGAATCGGCAGAAAAAACAAAATACTGACCGTCATACTGCTCa    >  1:494206/1‑47 (MQ=255) tGCCGGAATAGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:440638/1‑49 (MQ=255) tGCCGGAACCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGc  >  1:1710432/1‑49 (MQ=255) tGCCGCAATAGGCAGAAAAAACAAAATACTGACCGTCATACTGCTCAg   >  1:966041/1‑48 (MQ=38) |                                                 TGCCGGAATCGGCAGAATAAACAAAATACTGACCGTCATACTGCTCAGC  >  minE/2495559‑2495607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑