Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2535565	2535579	15	94 [0]	[0] 35	rfaP	kinase that phosphorylates core heptose of lipopolysaccharide

CAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGC  >  minE/2535580‑2535641 |                                                              cAGAGGTCAAAGAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:1066250/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTg                            >  1:1306770/1‑36 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACg   >  1:1617125/1‑61 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACg   >  1:1285300/1‑61 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:653355/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:1760512/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:1825220/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:1873033/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:341096/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:42079/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:432875/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:52204/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:643020/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:1680108/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:675107/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:67875/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:76051/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:834073/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:90976/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:970970/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:1688194/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:100468/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:1610146/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:1531673/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:1482859/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:143643/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:1435190/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:1427682/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:1317371/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:1278878/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:1224021/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:1164843/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:1115778/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGc  >  1:1036275/1‑62 (MQ=255) cAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACAGGAGACTCGTCGTACATTACGc  >  1:1752172/1‑62 (MQ=255) |                                                              CAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGC  >  minE/2535580‑2535641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑