Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2540460	2540526	67	44 [0]	[0] 35	[rfaJ]–[rfaY]	[rfaJ],[rfaY]

GATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATG  >  minE/2540527‑2540588 |                                                              gATCAAAGCCTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:335576/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAAtt                          >  1:391447/1‑38 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCaaa                      >  1:1011606/1‑42 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:712935/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:254151/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:330538/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:336207/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:578119/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:61515/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:1888427/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:77564/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:822397/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:823187/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:84583/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:884871/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:887841/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:944298/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:987058/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:1584413/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:1149497/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:1167636/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:1200219/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:132103/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:133119/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:1362457/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:1557043/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:1562972/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:241130/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:1603830/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:1629852/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:166155/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:1704062/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:1745187/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:1806887/1‑62 (MQ=255) gATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATg  >  1:1871438/1‑62 (MQ=255) |                                                              GATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATG  >  minE/2540527‑2540588

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑