Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2605237	2605303	67	198 [0]	[0] 65	uspA	universal stress global response regulator

CTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTACC  >  minE/2605304‑2605365 |                                                              cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:543288/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1021891/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1819333/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1859325/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1920/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:201690/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:226397/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:289220/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:290890/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:306550/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:345278/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:346473/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:360327/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:364090/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:370435/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:53513/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1786193/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:546853/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:625487/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:665324/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:668743/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:689351/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:689834/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:721773/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:782206/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:786498/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:79703/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:839178/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:865639/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:878155/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:882362/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:942589/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1397094/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1029951/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1042099/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1090912/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1091055/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:111017/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:117238/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1189752/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1190106/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1235535/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1236535/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:127905/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1283386/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1358670/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1368828/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1369845/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1523178/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1713968/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1676475/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1642190/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1576884/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1565363/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1737733/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1508097/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1499575/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1482557/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1457571/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:144425/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1428123/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAcc  <  1:1405910/62‑1 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAca  <  1:255802/62‑2 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTAca  <  1:1176599/62‑2 (MQ=255) cTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCAAAGAGACTGCTTTCTCTAcc  <  1:240241/62‑1 (MQ=255) |                                                              CTACGTGGATCAGAGAAACTTTCGCATTGTAGGGGCGAGCCATAGAGACTGCTTTCTCTACC  >  minE/2605304‑2605365

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑