Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2695484	2695880	397	9 [0]	[0] 45	[nudE]–[mrcA]	[nudE],[mrcA]

TTCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAGATCTG  >  minE/2695881‑2695942 |                                                              ttCATATAAGCGTCCGATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:240503/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGTACCGCCTTCGTAACCTGAgatctg  <  1:212870/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCTCCTTCGTAACCTGAgatctg  <  1:142794/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:33948/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:246843/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:248337/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:260610/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:270623/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:272826/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:283737/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:284551/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:29359/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:308499/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:234758/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:40439/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:58467/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:5853/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:67425/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:67744/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:71590/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:75620/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:79922/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:90282/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:9381/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:186990/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:121495/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:123350/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:131930/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:132339/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:132579/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:149135/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:16728/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:170142/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:174306/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:175908/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:237247/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:201722/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:202312/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:20481/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:205347/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:207345/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:210018/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:230427/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:231961/62‑1 (MQ=255) ttCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAgatctg  <  1:105546/62‑1 (MQ=255) |                                                              TTCATATAAGCGTCCCATGCAGGCTGGGCACTCTTGGCACCGCCTTCGTAACCTGAGATCTG  >  minE/2695881‑2695942

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑