| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | minE | 2,288,178 | C→A | I213I (ATC→ATA) | argE → | acetylornithine deacetylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 2,288,178 | 0 | C | A | 99.9% | 2130.5 / ‑4.1 | 753 | coding (639/1152 nt) | argE | acetylornithine deacetylase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (752/0); minor base . (1/0); total (753/0) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01 | |||||||||||
Only 100 of 753 total aligned reads displayed.
AGCGATCCAGCACGCGGAGTTAACGCTATCGAACTAATGCACGACGCCATCGGGCATATTTTGC > minE/2288128‑2288191 | aGCGATCCGGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:53188/1‑61 (MQ=255)aGCGATCCAGCTCGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:114128/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCatatat > 1:116248/1‑59 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCatat > 1:66538/1‑59 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:277602/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:308241/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:303260/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:296807/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:294794/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:292529/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:288352/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:285856/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:284554/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:283909/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:281580/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:279674/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:31849/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:275475/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:271895/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:271063/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:270487/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:266787/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:264931/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:26148/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:260031/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:100264/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:251891/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:68479/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:9653/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:94082/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:9301/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:90049/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:85244/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:82301/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:7993/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:75562/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:73756/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:71747/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:310598/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:64917/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:60179/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:51517/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:49769/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:4318/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:41355/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:35695/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:33596/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:255708/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:31453/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:138584/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:178503/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:250196/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:172293/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:168534/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:165368/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:162203/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:159639/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:157161/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:152752/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:150607/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:14675/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:174382/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:134958/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:132970/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:13083/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:127703/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:122365/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:12095/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:109680/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:108101/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:106507/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:103073/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:183046/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:248268/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:246030/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:241889/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:239912/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:236810/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:234033/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:228439/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:224253/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:222802/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:21949/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:216323/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:213418/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:21019/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:206299/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:202492/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:200239/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:197208/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:194159/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:190597/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:186029/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:181468/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAtt > 1:78076/1‑60 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCATAtt > 1:37902/1‑60 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGGGCACAttt > 1:306930/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTTAACGCTATCGAACTGATGCACGACGCCATAGCGCATAttt > 1:45739/1‑61 (MQ=255)aGCGATCCAGCACGCGGAGTGAACGCTATCGAACTGATGCACGACGCCATAGGGCATAtt > 1:148515/1‑60 (MQ=255)aGCGATCCAGCACGCGGAGTAAACGCTATCGAACTGATGCACGACGCCATAGGGCATAttt > 1:56925/1‑61 (MQ=255) | AGCGATCCAGCACGCGGAGTTAACGCTATCGAACTAATGCACGACGCCATCGGGCATATTTTGC > minE/2288128‑2288191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |