| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2905951 | 57 (1.180) | 4 (0.090) | 3/92 | NT | 6.9% | coding (143/1656 nt) | treC | trehalose‑6‑P hydrolase |
| ? | minE | = 2905964 | 56 (1.260) | coding (130/1656 nt) | treC | trehalose‑6‑P hydrolase | |||||
GCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2905879‑2905951‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatAAACTGGGCGTTGATGCCATCTGGCTAACCCCCTTTTATGTCTCTCCCCAGGTCGATAACGGTTACGA < minE/2905964‑2905897 GCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGGCAGATGGC < 1:1545386/71‑1GCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGG > 1:1956540/1‑70GCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGG < 1:311560/70‑1 CGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGGCAT < 1:2763603/71‑1 GTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGGCATAAACTGGGCGTTGATGCCATCTGG < 1:1778475/71‑1 TTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGGCAT > 1:1243315/1‑46 CTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGG < 1:286797/35‑1 ACATAAAAGGGGGTTAGCCAGATGGCATAAACTGGGCGTTG < 1:1888467/41‑1 ATAAAAGGGGGTTAGCCAGATGGCATAAACTGGGCGTTGAT > 1:2317719/1‑41 ATAAAAGGGGGTTAGCCAGATGGCATAAACTGGGCGTTGAT > 1:591634/1‑41 GCATAAACTGGGCGTTGATGCCATCTGGCTAACCCCCTTTTATGTCTCTCCCCAGGTCGATAACGGTTAC > 1:2839300/1‑70 GCATAAACTGGGCGTTGATGCCATCTGGCTAACCCCCTTTTATGTCTCTCCCCAGG < 1:1367825/56‑1 GCATAAACTGGGCGTTGATGCCATCTGGCTAACCCCCTTTTA > 1:2223053/1‑42 CATAAACTGGGCGTTGATGCCATCTGGCTAACCCCCTTTTATGTCTCTCCCCAGGTCGATAACGGTTACGA < 1:999767/71‑1 CATAAACTGGGCGTTGATACCATCTGGCTAACCCCCTTTTATGTCTCTCCCCAGGTCGATAACGGTTAC < 1:2105359/69‑1 TAAACTGGGCGTTGATGCCATCTGGCTAACCCCCTTTTATGTCTCTCCCCAGGTCGATAACGGT < 1:237862/64‑1 GCCGTATAGTTCGCTACGTCGTAACCGTTATCGACCTGGGGAGAGACATAAAAGGGGGTTAGCCAGATGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2905879‑2905951‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatAAACTGGGCGTTGATGCCATCTGGCTAACCCCCTTTTATGTCTCTCCCCAGGTCGATAACGGTTACGA < minE/2905964‑2905897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |