| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1611749 = | 7 (0.140) | 18 (0.430) +ATGCGGT |
12/86 | NT | 46.2% | coding (1404/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | minE | = 2603083 | 42 (0.870) | coding (684/753 nt) | yhiQ | predicted SAM‑dependent methyltransferase | |||||
AGCCTGCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAGTGTAA > minE/2603013‑2603152 | aGCCTGCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAAt < 1:2146291/71‑1 (MQ=255) ccTGCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGt < 1:2565202/71‑1 (MQ=255) ttGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAAt < 1:2935117/60‑1 (MQ=255) ttGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTcgccacgc > 1:2469767/1‑70 (MQ=255) gCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAAcg < 1:2934333/70‑1 (MQ=255) gACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCgg < 1:1256557/71‑1 (MQ=255) cAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAg > 1:1961058/1‑71 (MQ=255) aaaCGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGt < 1:634964/71‑1 (MQ=255) aaCGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCaaa > 1:1071533/1‑61 (MQ=255) aCGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCa > 1:2755173/1‑71 (MQ=255) cgcgTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCAc > 1:2342518/1‑71 (MQ=255) tggtAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAAcgc < 1:1905315/55‑1 (MQ=255) gtAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTGAAGGGc < 1:389447/70‑1 (MQ=255) gtAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAg > 1:246950/1‑67 (MQ=255) gtAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCa > 1:626676/1‑71 (MQ=255) gtAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCa > 1:616437/1‑71 (MQ=255) aaaGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATc > 1:961171/1‑71 (MQ=255) aGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGc < 1:1159346/71‑1 (MQ=255) gcgcCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCt < 1:123840/71‑1 (MQ=255) gcCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCttt < 1:1091741/71‑1 (MQ=255) cGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGat < 1:730904/71‑1 (MQ=255) cGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGa > 1:1692052/1‑70 (MQ=255) ggACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGata > 1:920881/1‑71 (MQ=255) ggACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGata > 1:1094387/1‑71 (MQ=255) ggACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGat > 1:867674/1‑70 (MQ=255) aCTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCtt > 1:645351/1‑64 (MQ=255) tACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTa > 1:1696096/1‑71 (MQ=255) aCGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCttt < 1:634774/62‑1 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGt > 1:2423922/1‑42 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGa > 1:981694/1‑63 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTAt < 1:633901/70‑1 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTAt < 1:235478/70‑1 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATg < 1:485479/71‑1 (MQ=255) cgcgCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATg > 1:1591895/1‑71 (MQ=255) agcgccACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccga < 1:2056778‑M2/70‑53 (MQ=255) agcgccACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccga < 1:2550066‑M2/70‑53 (MQ=255) agcgccACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccga < 1:904597‑M2/70‑53 (MQ=255) agcgccACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccga < 1:1464249‑M2/70‑53 (MQ=255) agcgccACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccg > 1:2494926‑M2/2‑19 (MQ=255) gcgcCACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgat > 1:2906089‑M2/1‑18 (MQ=255) gcgcCACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgat > 1:1206517‑M2/1‑18 (MQ=255) gcgcCACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcacc > 1:2466383‑M2/1‑18 (MQ=255) cgcCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCa < 1:2845919/71‑1 (MQ=255) ccACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatcc < 1:2205183‑M2/70‑56 (MQ=255) ccACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATg < 1:1015110/67‑1 (MQ=255) ccACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAgg < 1:2708256/71‑1 (MQ=255) cACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgc > 1:2718700‑M2/1‑14 (MQ=255) cACCGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccg < 1:1526190‑M2/56‑43 (MQ=255) cACCGCTGGCGAATaccgcattcaggaaggaaatgcg > 1:2536862‑M2/1‑14 (MQ=255) ccGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgcca > 1:619910‑M2/1‑12 (MQ=255) ccGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcac < 1:1457744‑M2/46‑35 (MQ=255) ccGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCttt < 1:2579956/54‑1 (MQ=255) cGCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaacc > 1:1307960‑M2/1‑11 (MQ=255) cGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTaa < 1:2079773/40‑1 (MQ=255) cGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCttt < 1:270702/53‑1 (MQ=255) gCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaa > 1:1440947‑M2/1‑10 (MQ=255) gCTGGCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaa > 1:186762‑M2/1‑10 (MQ=255) gCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTa > 1:2964279/1‑68 (MQ=255) ggCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGa > 1:1574650/1‑51 (MQ=255) gCGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaa > 1:2870819‑M2/1‑6 (MQ=255) gCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAgg < 1:1587308/62‑1 (MQ=255) gCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAgg < 1:493631/62‑1 (MQ=255) gCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAgg < 1:906862/62‑1 (MQ=255) cGAATaccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaa > 1:712096‑M2/1‑5 (MQ=255) aTGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCAt < 1:1338956/38‑1 (MQ=255) aTGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAGTGtaa < 1:2122069/71‑1 (MQ=255) aTGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAGTGtaa < 1:2236595/71‑1 (MQ=255) taccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaa > 1:2674662‑M2/1‑1 (MQ=255) taccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaa > 1:2141486‑M2/1‑1 (MQ=255) taccgcattcaggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaa > 1:2747966‑M2/1‑1 (MQ=255) | AGCCTGCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAGTGTAA > minE/2603013‑2603152 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |