| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 48665 | 92 (1.130) | 8 (0.110) | 4/86 | NT | 9.2% | coding (897/1863 nt) | kefC | potassium:proton antiporter |
| ? | AP009048 | = 48685 | 77 (1.080) | coding (917/1863 nt) | kefC | potassium:proton antiporter | |||||
TTTTTCATCGGTGTTGGCATGTCGATAGACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/48594‑48665‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attttgATGATGAGGAAACCGAGCAGCAAAATGACAATGCGCAATGGGTTTTCAAGCAGCGTGCCAAAGTCTAT < AP009048/48685‑48618 TTTTTCATCGGTGTTGGCATGTCGATATACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTTT < 1:6806259/71‑1TTTTTCATCGGTGTTGGCATGTCGATAGACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTTT < 1:955754/71‑1TTTTTCATCGGTGTTGGCATGTCGATAGACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTTT < 1:3089660/71‑1TTTTTCATCGGTGTTGGCATGTCGATAGACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTT < 1:6505963/70‑1TTTTTCATCGGTGTTGGCATGTCGATAGACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTT < 1:4462513/70‑1TTTTTCATCGGTGTTGGCATGTCGATAGACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATT < 1:3593018/69‑1 TTTTCATCGGTGTTGGCATGTCGATAGACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTTTG > 1:955134/1‑71 TTTCATCGGTGTTGGCATGTCGATAGACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTTTG < 1:6014747/70‑1 TGTCGATAGACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTT < 1:2047531/51‑1 TGTCGATAGACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTT < 1:2449951/51‑1 TGTCGATAGACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTT < 1:6369429/51‑1 TGTCGATAGACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTT < 1:6023567/51‑1 TGTCGATAGACTTTCGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTT < 1:4176618/51‑1 CGATAGACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCA > 1:1107614/1‑45 TAGACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTTTGATGATGAGGAAACCGA > 1:3826017/1‑63 GACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTTTGATGATGAGGAAACCGAGCAGCAAAA < 1:3673791/70‑1 GACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTTTGATGATGAGGAAACCGAGCAGCAAAA < 1:3178508/70‑1 TTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATT > 1:5533556/1‑39 TTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATT > 1:5524163/1‑39 TTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATT > 1:1806734/1‑39 TTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCAT > 1:6506244/1‑38 TTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTTT < 1:1637205/40‑1 CGCTGCTTGAAAACCCATTGCGCATTGTCATTTTGATGATGAGGAAACCGAGCAGCAAA < 1:4874556/59‑1 CGCTGCTTGAAAACCCATTGCGCATTGTCATTTTGATGATGAGGAAACCGAGCAGCAAA < 1:2510662/59‑1 CTGCTTGAAAACCCATTGCGCATTGTCATTTTGATGATGAGGAAACCGAGCAGCAAAAT > 1:3271340/1‑59 CTGCTTGAAAACCCATTGCGCATTGTCATTTTGATGATGAGGAAACCGAGCAGCAAAAT > 1:7864391/1‑59 CTGCTTGAAAACCCATTGCGCATTGTCATTTTGATGATGAGGAAACCGAGCAGCAAAAT > 1:7258244/1‑59 ATTTTGATGATGAGGAAACCGAGCAGCAAAATGACAATGCGCAATGGGTTTTCAAGCAGCGTGCCAAAGTC > 1:6408216/1‑71 ATTTTGATGATGAGGAAACCGAGCAGCAAAATGACAATGCGCAATGGGTTTTCAAGCAGCGTGCCAAAGT > 1:5307474/1‑70 ATTTTGATGATGAGGAAACCGAGCAGCAAAATGACAA > 1:5653373/1‑37 ATTTTGATGATGAGGAAACCGAGCAGCAAAATGAC < 1:4881312/35‑1 TTTTGATGATGAGGAAACCGAGCAGCAAAATGACAATGCGCAATGGGTTTTCAAGCAGCGTGCCAAAGTC > 1:4166353/1‑70 TTTTGATGATGAGGAAACCGAGCAGCAAAATGACAATGCGCAATGGGTTTTCAAGCAGCGTGCCAAAGTC > 1:128088/1‑70 TTTTGATGATGAGGAAACCGAGCAGCAAAATGACAATGCGCAATGGGTTTTCAAGCAGCGTGCCAAAGT > 1:914846/1‑69 TTTTGATGATGAGGAAACCGAGCAGCAAAATGACAATGCGCA > 1:6582269/1‑42 TTGATGATGAGGAAACCGAGCAGCAAAATGACAATGCGCAATGGGTTTTCAAGCAGCGTGCCAAAGTCTAT > 1:7620020/1‑71 TTGATGATGAGGAAACCGAGCAGCAAAATGACAATGCGCAATGGGTTTTCAAGCAGCGTGCCAAAGTCTA < 1:2634094/70‑1 TTGATGATGAGGAAACCGAGCAGCAAAATGACAATGCGCAATGGGTTTTCAAGCAGCGTGCCAAAGTCTA < 1:6327854/70‑1 TTGATGATGAGGAAACCGAGCAGCAAAATGACAATGCGCAATGGGTTTTCAAGCAGCGTGCCAAA < 1:6402804/65‑1 TTGATGATGAGGAAACCGAGCAGCAAAATGACAATGCGCAATGGGTTTTCAAGCAGCGTGCCAAA < 1:7676512/65‑1 GATGATGAGGAAACCGAGCAGCAAAATGACAATGCGCAATGGGTTTTCAAGCAG > 1:6977769/1‑54 TTTTTCATCGGTGTTGGCATGTCGATAGACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/48594‑48665‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attttgATGATGAGGAAACCGAGCAGCAAAATGACAATGCGCAATGGGTTTTCAAGCAGCGTGCCAAAGTCTAT < AP009048/48685‑48618 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |