| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 226815 = | NA (NA) | 5 (0.070) | 4/92 | NT | NA | noncoding (1057/2904 nt) | rrlH | 23S ribosomal RNA |
| ? | AP009048 | 226840 = | NA (NA) | noncoding (1082/2904 nt) | rrlH | 23S ribosomal RNA | |||||
CTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/226886‑226815‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATGCA > AP009048/226840‑226909 CTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:5073538/1‑71CTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:2313005/1‑71CTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:2747663/1‑71CTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:2990459/1‑71CTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:3138634/1‑71CTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:7803043/1‑71 TTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACAT > 1:2090347/1‑71 CCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACAT > 1:3770902/1‑69 CCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACAT < 1:6561773/69‑1 CCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA < 1:4286273/68‑1 CCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA < 1:2000938/68‑1 CCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA < 1:4922503/68‑1 CCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAAC < 1:1404493/67‑1 CCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAAC < 1:1614748/67‑1 CCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAAC < 1:6968849/67‑1 CGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAAC > 1:7543126/1‑66 CAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAAC > 1:2945972/1‑62 CAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAAC > 1:1169281/1‑62 CAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAAC > 1:1196468/1‑62 CGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAAC > 1:6366483/1‑57 GACTCGACTAGTGAGCTATTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAAC > 1:6546170/1‑56 ACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA < 1:1731395/56‑1 AGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACAT > 1:3873234/1‑45 AGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:5975844/1‑44 AGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:3304746/1‑44 ACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACAT > 1:6911080/1‑38 ACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACAT > 1:625288/1‑38 ACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACAT > 1:4926168/1‑38 ACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:3019386/1‑37 ACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:7252384/1‑37 ACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACA > 1:6464499/1‑37 ACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAAC > 1:5852574/1‑36 ACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAAC > 1:1429803/1‑36 CGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAAC > 1:7592461/1‑35 CGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAAC > 1:6099496/1‑35 CGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAAC > 1:1626822/1‑35 TGATGGATGCTTCTAAGCCAACATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGC > 1:1027312/1‑60 GATGGCTGCTTCTAAGCCAACATTTAAAGAAAGCGTAATAGCTCACTGGTCGA < 1:605015/53‑1 TGGCTGCTTCTAAGCCAACATTTAAAGAAAGCGTAATAGCTCACTGGTC < 1:7100845/49‑1 GCTGCTTCTAAGCCATCATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGT > 1:2870829/1‑70 GCTGCTTCTAAGCCAACATTTAAAGAAAGCGTAATAG > 1:4422330/1‑37 CCACCATTTAAAGAAAGCGTAATAGCTCACTGATCGAGTCGTCCTGCGCGGAAGATGTAACGGGGCTAAgc < 1:7226539/71‑3 CATTTAGAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:16730/1‑71 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:6893434/1‑71 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:5272754/1‑71 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:4340532/1‑71 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:2120881/1‑71 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:5795289/1‑71 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:4663379/1‑71 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAA > 1:5743429/1‑56 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAA > 1:6258654/1‑56 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGA > 1:4645955/1‑48 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGA > 1:5746536/1‑48 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGG > 1:4812821/1‑47 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTG > 1:2134111/1‑42 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTG > 1:6752503/1‑42 CATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTG < 1:3991527/42‑1 ATTTAAATAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATGC < 1:4482860/71‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATGC < 1:5360730/71‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATGC < 1:337495/71‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATGC < 1:898220/71‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATGC < 1:2664221/71‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:4612798/1‑70 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:7385413/1‑70 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG < 1:7681574/70‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG < 1:6503869/70‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG < 1:7839077/70‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:6410743/1‑70 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:4528667/1‑70 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATG > 1:3237621/1‑70 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACC < 1:3742272/67‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAAC < 1:2978870/66‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTA < 1:2592344/63‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTA > 1:476400/1‑54 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGAT < 1:3340365/51‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGG < 1:6473091/46‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGG < 1:1530471/46‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGG < 1:2133425/46‑1 ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGG < 1:6079086/46‑1 TTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCTGAAGATGTAACGGGGCTA < 1:778413/62‑1 TTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGT < 1:3630027/52‑1 TTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGT < 1:2038587/52‑1 TTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGT < 1:1304326/52‑1 TTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGT < 1:1295259/52‑1 TTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGA < 1:3443753/46‑1 TTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGA < 1:3510457/46‑1 TTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGA < 1:953608/46‑1 TTTAAAGAAAGCGTAATAGCTCACTGGTCAAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATGCA < 1:6211871/71‑1 CTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGCCAACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/226886‑226815‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATGCA > AP009048/226840‑226909 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |