| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 381061 | NA (NA) | 8 (0.110) | 5/86 | NT | NA | coding (164/906 nt) | insD | IS2 insertion element transposase InsAB' |
| ? | AP009048 | = 381076 | NA (NA) | coding (179/906 nt) | insD | IS2 insertion element transposase InsAB' | |||||
Only 100 of 239 total aligned reads displayed.
TCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/380986‑381061‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctccgATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGT < AP009048/381076‑381007 CATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTC > 1:3907312/1‑71 CATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTC > 1:5408865/1‑71 CATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTC > 1:1525213/1‑71 CATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTC > 1:7289152/1‑71 CATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTC > 1:2665089/1‑71 CATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTC > 1:6210750/1‑71 ATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCT > 1:239068/1‑71 ATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCT < 1:1516613/71‑1 ATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCT > 1:7255782/1‑71 ATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCT < 1:6649164/71‑1 ATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCT < 1:252010/71‑1 ATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTC < 1:7356092/70‑1 TTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTC > 1:677319/1‑71 TCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCC > 1:1442446/1‑71 TCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTC < 1:2256156/70‑1 TCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTC > 1:4347210/1‑70 TCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTC < 1:6107698/68‑1 CTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG > 1:413242/1‑71 CTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG > 1:129470/1‑71 CTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG > 1:6165243/1‑71 CTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCC < 1:7937044/70‑1 TCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG > 1:6530534/1‑70 TCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG > 1:3434916/1‑70 AGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG < 1:2158568/68‑1 AGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG < 1:7842883/68‑1 AGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG < 1:3564791/68‑1 AGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG < 1:5209821/68‑1 AGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG < 1:5965113/68‑1 AGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG < 1:1832752/68‑1 AGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG < 1:2601171/68‑1 AGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG < 1:6347833/68‑1 AGACGAACCGATGACTAGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG < 1:4803642/68‑1 GACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG < 1:2876460/67‑1 ACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG > 1:3764643/1‑66 GAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTC < 1:4404558/62‑1 GAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTC < 1:4289450/62‑1 GAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTC < 1:3603769/62‑1 CCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCT < 1:393635/58‑1 GATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTT < 1:4937641/54‑1 ATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCC < 1:4238917/57‑1 GATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGATAACATGGTGTATACGGAG < 1:1312778/71‑1 GATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTC > 1:745934/1‑49 GATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTC > 1:7694800/1‑49 ATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG < 1:3241472/46‑1 GGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCC < 1:4517834/43‑1 GGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCC < 1:549136/43‑1 CCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCT > 1:4614017/1‑39 CGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCC < 1:303125/40‑1 TCGTCACACTGATGATACGGATGTGCTTCTCCGATAACATGGTGTATACGG > 1:7526948/1‑51 TCGTCACACTGATGATACGGATGTGCTTCTCCGATAACATGGTGTATACGG > 1:3362351/1‑51 GTCACACTGATGATACGGATGTGCTTCTCCGATAACATGGTGTA < 1:2336503/44‑1 TCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCA < 1:1945939/70‑1 TCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCA < 1:2063996/70‑1 TCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCAT > 1:5030062/1‑67 TCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGAC < 1:2590255/52‑1 CTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:4537218/1‑71 CTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:4686418/1‑71 CTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:4714793/1‑71 CTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:1128031/1‑71 CTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:1759268/1‑71 CTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:5901852/1‑71 TCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGGCATCCATC > 1:6899384/1‑70 TCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:1037348/1‑70 TCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:1965413/1‑70 TCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:7630351/1‑70 TCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:3197094/1‑70 TCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCA < 1:4055083/68‑1 TCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGG > 1:3081361/1‑61 TCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTG > 1:277266/1‑48 TCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTG > 1:6683567/1‑46 CCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGG > 1:7209018/1‑57 CCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGG > 1:341133/1‑57 CCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGA > 1:7884484/1‑48 CCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATC < 1:4854449/41‑1 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAG > 1:5687587/1‑71 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAG > 1:4106335/1‑71 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAG > 1:643769/1‑71 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAG > 1:7675393/1‑71 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAG < 1:6079822/71‑1 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAG > 1:5639667/1‑71 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:7234923/1‑68 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC < 1:862402/68‑1 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC < 1:4424650/68‑1 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC < 1:6890135/68‑1 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC < 1:6572779/68‑1 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:5866492/1‑68 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC < 1:5273822/68‑1 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC > 1:4339212/1‑68 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGC < 1:271014/57‑1 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGC < 1:387292/57‑1 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGG > 1:929357/1‑56 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGG > 1:399221/1‑56 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTG > 1:1864712/1‑53 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGAC < 1:200839/48‑1 CGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGT < 1:3880739/43‑1 CGACAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATC < 1:7806435/68‑1 GATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGT > 1:3015470/1‑71 GATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGA > 1:1105389/1‑49 GATAACATGGTGTATACGGAGAAGCACATCCGTATC < 1:7215573/36‑1 GATAACATGGTGTATACGGAGAAGCACATCCGTATC < 1:5078206/36‑1 TCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/380986‑381061‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctccgATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGT < AP009048/381076‑381007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |