| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 381236 = | NA (NA) | 9 (0.120) | 4/90 | NT | NA | coding (339/906 nt) | insD | IS2 insertion element transposase InsAB' |
| ? | AP009048 | 381263 = | NA (NA) | coding (366/906 nt) | insD | IS2 insertion element transposase InsAB' | |||||
Only 100 of 132 total aligned reads displayed.
AGCAGAACTCGAACCCGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/381309‑381236‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgtGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGT > AP009048/381263‑381332 AGCAGAACTCGAACCCGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCC < 1:6041686/71‑1AGCAGAACTCGAACCCGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCC > 1:2420716/1‑71AGCAGAACTCGAA‑CCGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCC > 1:2658723/1‑71 GCAGAACTCGAACCCGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCCCTCTGCCTGTATGTGCCC > 1:3947004/1‑71 GCAGAACTCGAACCCGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCC > 1:529145/1‑71 GCAGAACTCGAACCCGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCC < 1:1928008/71‑1 CAGAACTCGAACCCGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCCG > 1:1596685/1‑71 CAGAACTCGAACCCGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCC > 1:2991235/1‑70 AGAACTCGAACCCGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCCGT < 1:521390/71‑1 AGAACTCGAACCCGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCCGT > 1:3656071/1‑71 AGAACTCGAACCCGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCCGT < 1:6867950/71‑1 AGAACTCGAACCCGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCCGT < 1:5880898/71‑1 AGAACTCGAACCCGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCCGT > 1:7428324/1‑71 AGAACTCGAACCCGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCCGT < 1:442766/71‑1 AGAACTCGAACACGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCCGT > 1:7923325/1‑71 ACTCGAACCCGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCC > 1:7641331/1‑65 TCGAACCCGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCCG > 1:6754055/1‑65 CAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCCGT > 1:3723785/1‑56 CAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCCGT > 1:4680642/1‑56 AGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCCGT < 1:40895/53‑1 ACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCCGT > 1:3545182/1‑50 TCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCC > 1:5004650/1‑44 TCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCC > 1:220667/1‑44 TCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCC > 1:4360017/1‑44 TCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCC > 1:3511079/1‑43 TCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCC > 1:2810214/1‑43 ACGGCCACTCTGCCTGTATGTGCCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTT > 1:2014396/1‑63 TCTGCCTGTATGTGCGCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGG < 1:3132958/53‑1 TCTGCCTGTATGTGCCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGG < 1:4092901/53‑1 GCCTGTATGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGAC < 1:3873938/47‑1 GCCTGTATGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGAC < 1:7735427/47‑1 GCCTGTATGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGAC < 1:7798040/47‑1 CCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTG < 1:45068/71‑1 CCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTG > 1:2889200/1‑71 CCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTG < 1:3306446/71‑1 CCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTG < 1:7502922/71‑1 CCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACT < 1:6977530/70‑1 CCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTG > 1:3672889/1‑49 CCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTG > 1:1413634/1‑49 CCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGGTCGAGTTCTGCT < 1:7741178/51‑1 CGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTGGAGTTCTGCTGTGATAACGGAGAGAGACTGC < 1:918743/71‑1 CGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGTAGAGAGACTGC < 1:5552391/71‑1 CGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGGGAGAGACTGC > 1:6208123/1‑71 CGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGC > 1:4478669/1‑71 CGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGC < 1:6312138/71‑1 CGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGC < 1:6532818/71‑1 CGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGC > 1:870280/1‑71 CGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGC > 1:1513331/1‑71 CGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGC > 1:4282942/1‑71 CGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAG < 1:3635443/62‑1 CGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATA < 1:4022425/56‑1 CGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGT < 1:6732977/44‑1 CGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAG < 1:4513650/43‑1 CGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGT < 1:7232895/38‑1 GTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCG < 1:2898839/71‑1 GTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCG > 1:7314131/1‑71 GTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCG < 1:6964970/71‑1 GTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCG < 1:6103369/71‑1 GTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCG < 1:6004384/71‑1 GTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCG > 1:5531240/1‑71 GTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCG > 1:3421375/1‑71 GTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCG > 1:4589016/1‑71 GTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGC < 1:1312598/70‑1 GTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGC < 1:2528211/70‑1 GTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGC < 1:4738159/70‑1 GTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAG < 1:3342019/65‑1 GTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAG < 1:1855524/61‑1 GTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAG < 1:4739353/61‑1 GTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAG < 1:7436772/61‑1 GTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAA > 1:7804894/1‑56 GTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAG < 1:6529121/42‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGT < 1:7369350/71‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGT > 1:7262545/1‑71 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGT > 1:3614753/1‑71 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGT > 1:221623/1‑71 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGT < 1:7372321/71‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGT > 1:7388625/1‑71 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGT > 1:5094364/1‑71 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGT < 1:1270359/71‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGT > 1:1068119/1‑71 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGT > 1:3603900/1‑71 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGT > 1:3942320/1‑71 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCG > 1:16743/1‑70 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACT < 1:271032/67‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAG < 1:103356/64‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAG < 1:3151232/64‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGAT < 1:5886589/53‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGAT < 1:3471369/53‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGAT < 1:17459/53‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTG < 1:2610116/46‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTG < 1:1865885/46‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGA < 1:5030705/40‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCG < 1:4844990/39‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTC < 1:1058738/38‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTC < 1:2646994/38‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTC < 1:6109957/38‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTC < 1:3010520/38‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGT < 1:6288126/36‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGT < 1:911345/36‑1 TGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGT < 1:5521985/36‑1 AGCAGAACTCGAACCCGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCTGTATGTGCCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/381309‑381236‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgtGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGT > AP009048/381263‑381332 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |