| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 421854 = | 88 (1.080) | 6 (0.080) | 3/90 | NT | 6.7% | coding (116/1818 nt) | malZ | maltodextrin glucosidase |
| ? | AP009048 | 421887 = | 87 (1.160) | coding (149/1818 nt) | malZ | maltodextrin glucosidase | |||||
GGTGACGCCAGGCTGCGGCTGACTGCGCTGCTTATGCATCGGTACTGACATTTCTTCGTTATCGTGTTCTGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/421927‑421854‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtacCGATGCATAAGCAGCGCAGTCAGCCGCAGCCTGGCGTCACCGCATGGCGTGCGGCGAT > AP009048/421887‑421944 GGTGACGCCAGGCTGCGGCTGACTGCGCTGCTTATGCATCGGTACTGACATTTCTTCGTTATCGTGTTCTG < 1:1919739/71‑1GGTGACGCCAGGCTGCGGCTGACTGCGCTGCTTATGCATCGGTACTGACATTTCTTCGTTATCGTGTTCTG > 1:1984075/1‑71GGTGACGCCAGGCTGCGGCTGACTGCGCTGCTTATGCATCGGTACTGACATTTCTTCGTTATCGTGTTCTG < 1:6227108/71‑1GGTGACGCCAGGCTGCGGCTGACTGCGCTGCTTATGCATCGGTACTGACATTTCTTCGTTATCGTGTTCTG > 1:3884389/1‑71 GTGACGCCAGGCTGCGGCTGACTGCGCTGCTTATGCATCGGTACTGACATTTCTTCGTTATCGTGTTCTG < 1:889618/70‑1 TGACGCCAGGCTGCGGCTGACTGCGCTGCTTATGCATCGGTACTGACATTTCTTCGTTATCGTGTTCTGTA > 1:1503508/1‑71 GACGCCAGGCTGCGGCTGACTGCGCTGCTTATGCATCGGTACTGACATTTCTTCGTTATCGTGTTCTGTAC > 1:5313708/1‑71 GCCAGGCTGCGGCTGACTGCGCTGCTTATGCATCGGTACTGACATTTCTTCGTTATCGTGTTCTGa > 1:6651754/1‑65 GCCAGGCTGCGGCTGACTGCGCTGCTTATGCATCGGTACTGACATTTCTTCGTTATCGTGTTCTGTA > 1:5104170/1‑67 CGGTACTGACATTTCTTCGTTATCGTGTTCTGTACCGATGCATAAGCAGCGCAGTCAGCCGCAGCCTGGCG > 1:3754452/1‑71 CGGTACTGACATTTCTTCGTTATCGTGTTCTGTAC > 1:7261852/1‑35 tCATTTCTTCGTTATCGTGTTCTGTACCGATGCATAAGCAGCGCAGTCAG < 1:55962/49‑1 ACATTTCTTCGTTATCGTGTTCTGTACCGATGCATAAGCAGCGCAGTCAG < 1:4179664/50‑1 ACATTTCTTCGTTATCGTGTTCTGTACCGATGCATAAGCAGCGCAGTCAG < 1:674008/50‑1 ATTTCTTCGTTATCGTGTTCTGTACCGATGCATAAGCAGCGCAGTCAGCCGCAGCCTGGCGTCACCGCATG > 1:2700897/1‑71 ATTTCTTCGTTATCGTGTTCTGTACCGATGCATAAGCAGCGCAGTCAGCCGCAGCCTGGCGTCACCGCA > 1:4222543/1‑69 TACCGATGCATAAGCAGCGCAGTCAGCCGCAGCCTGGCGTCACCGCATGGCGTGCGGCGAT < 1:5395881/61‑1 CCGATGCATAAGCAGCGCAGTCAGCCGCAGCCTGGCGTCACC < 1:5823259/42‑1 GGTGACGCCAGGCTGCGGCTGACTGCGCTGCTTATGCATCGGTACTGACATTTCTTCGTTATCGTGTTCTGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/421927‑421854‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtacCGATGCATAAGCAGCGCAGTCAGCCGCAGCCTGGCGTCACCGCATGGCGTGCGGCGAT > AP009048/421887‑421944 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |