New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AP009048 | = 546084 | 71 (0.870) | 5 (0.070) | 3/84 | NT | 7.4% | coding (181/1668 nt) | fdrA | predicted acyl‑CoA synthetase with NAD(P)‑binding Rossmann‑fold domain |
? | AP009048 | = 546096 | 64 (0.920) | coding (193/1668 nt) | fdrA | predicted acyl‑CoA synthetase with NAD(P)‑binding Rossmann‑fold domain |
AATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/546008‑546084 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacgcAAATATCGTTCGGCGTGGCGTTATTAAAATCGTCATGCCAGAAACCTGTGGTATCTAATAACGCTTTA < AP009048/546096‑546029 AATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACG > 1:7824831/1‑71 GATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCA > 1:4801531/1‑71 ATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCAC < 1:5187025/71‑1 ATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCAC < 1:49978/71‑1 GGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGC > 1:1685325/1‑71 GCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCA > 1:1965140/1‑58 AAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCAAATATCGTTTGGCGTG < 1:5734/71‑1 TTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGC < 1:6244815/44‑1 ATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCAAATATCGTTCGGCGTGG > 1:1187446/1‑65 ACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCAAATATCGTTCGGCGTGG < 1:2803328/58‑1 ACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCAAATATCGTTCGGCGTGG < 1:2087292/58‑1 ACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCAAATATCGTTCGGCGTGG < 1:7555018/58‑1 GCCACGCAAATATCGTTCGGCGTGGCGTTATTAAAATCGTCATGCCAGAAACCTGTGGTATCTAATAACGC > 1:1959132/1‑71 CCACGCAAATATCGTTCGGCGTGGCGTTATTAAAATCGTCATGCCAGAAACCTGTGGTATCTAATAACGCT > 1:3862082/1‑71 CCACGCAAATATCGTTCGGCGTGGCGTTATTAAAATCGTCATGCCAGAAACCTGTG < 1:5576948/56‑1 CCACGCAAATATCGTTCGGCGTGGCGTTATTAAAATCGTCATGCCAGAAACCTG < 1:6074838/54‑1 CCACGCAAATATCGTTCGGCGTGGCGTTATTAAAATCGTCATGCCAGAAAC < 1:6314711/51‑1 CACGCAAATATCGTTCGGCGTGGCGTTATTAAAATCGTCATGCCAGAAACCTGTGGTATCTAA < 1:715449/63‑1 ACGCAAATATCGTTCGGCGTGGCGTTATTAAAATCGTCATGCCAGAAACCTGTGGTATCTAATAACGCTT > 1:7347165/1‑70 ACGCAAATATCGTTCGGCGTGGCGTTATTAAAATCGTCAT < 1:5805780/40‑1 ACGCAAATATCGTTCGGCGTGGCGTTATTAAAATCGTCAT < 1:7887620/40‑1 CGCAAATATCGTTCGGCGTGGCGTTATTAAAATCGTCATGCCAGAAACCTGTGGTATCTAATAACGCTTTA > 1:6543574/1‑71 AATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/546008‑546084 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacgcAAATATCGTTCGGCGTGGCGTTATTAAAATCGTCATGCCAGAAACCTGTGGTATCTAATAACGCTTTA < AP009048/546096‑546029 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |