| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 625985 = | 73 (0.900) | 7 (0.090) | 4/90 | NT | 11.4% | coding (693/1611 nt) | entE | 2,3‑dihydroxybenzoate‑AMP ligase component of enterobactin synthase multienzyme complex |
| ? | AP009048 | 626015 = | 42 (0.560) | coding (723/1611 nt) | entE | 2,3‑dihydroxybenzoate‑AMP ligase component of enterobactin synthase multienzyme complex | |||||
GAACAACCGTTCCTCCGGCAAGAAAGACGCCCAGCGATCCTGGCGAACTCATGGCGTAGTTATGAGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/626055‑625985‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccAGGATCGCTGGGCGTCTTTCTTGCCGGAGGAACGGTTGTTCTGGCGGCCGATCCCAGCGCCACGCTCTGT > AP009048/626015‑626084 GAACAACCGTTCCTCCGGCAAGAAAGACGCCCAGCGATCCTGGCGAACTCATGGCGTAGTTATGAGCCGCC < 1:88356/71‑1GAACAACCGTTCCTCCGGCAAGAAAGACGCCCAGCGATCCTGGCGAACTCATGGCGTAGTTATGAGCCGCC > 1:2207377/1‑71GAACAACCGTTCCTCCGGCAAGAAAGACGCCCAGCGATCCTGGCGAACTCATGGCGTAGTTATGAGCCGCC > 1:3347587/1‑71GAACAACCGTTCCTCCGGCAAGAAAGACGCCCAGCGATCCTGGCGAACTCATGGCGTAGTTATGAGCCGCC > 1:3356618/1‑71GAACAACCGTTCCTCCGGCAAGAAAGACGCCCAGCGATCCTGGCGAACTCATGGCGTAGTTATGAGCCGCC > 1:3642033/1‑71GAACAACCGTTCCTCCGGCAAGAAAGACGCCCAGCGATCCTGGCGAACTCATGGCGTAGTTATGAGCCGCC > 1:6643405/1‑71 AACAACCGTTCCTCCGGCAAGAAAGACGCCCAGCGATCCTGGCGAACTCATGGCGTAGTTATGAGCCGCC < 1:7896582/70‑1 GGCAAGAAAGACGCCCAGCGATCCTGGCGAACTCATGGCGTAGTTATGAGCC < 1:7715661/52‑1 CGAACTCATGGCGTAGTTATGAGCCGCCGGGATCGCTGGGCGTCTTTCTTGCCGGAGGAACGGTTGTTCTG > 1:4599783/1‑71 CGAACTCATGGCGTAGTTATGAGCCGCCGGGATCGCTGGGCGTCTTTCTTGCCGG > 1:6742168/1‑55 ATGGCGTAGTTATGAGCCGCCAGGATCGCTGGGCGTCTTTCTTGCCGGAGGAACGGTTGTTCTGGCGGCC < 1:1513073/70‑1 GGCGTAGTTATGAGCCGCCAGGATCGCTGGGCGTCTTTCTTGCCGGAGGAACG < 1:1389376/53‑1 GGCGTAGTTATGAGCCGCCAGGATCGCTGGGCGTCTTTCTTGCCGGAGGAACG < 1:7570887/53‑1 CGTAGTTATGAGCCGCCAGGATCGCTGGGCGTCTTTCTTGCCGGAGGAACGGT > 1:6440912/1‑53 CGTAGTTATGAGCCGCCAGGATCGCTGGGCGTCTTTCTTGCCGGAGGAACGGT > 1:3444715/1‑53 CGCCAGGATCGCTGTGCGTCTTTCTTGCCGGAGGAACGGTTGTTCTGGCGGCCGATCCCAGCGCCACGCTC > 1:2008770/1‑71 CGCCAGGATCGCTGGGCGTCTTTCTTGCCGGAGGAACGGTTGTTCTGGCGGCCGATCCCAGCGCCACGCTC > 1:4596636/1‑71 CGCCAGGATCGCTGGGCGTCTTTCTTGCCGGAGGAACGGTTGTTCTGGCGGCCGATCCCAGCGCCACGCTC > 1:3886195/1‑71 CCAGGATCGCTGGGCGTCTTTCTTGCCGGACGAACGG < 1:10936/37‑1 CAGGATCGCTGGGCGTCTTTCTTGCCGGAGGAACGGTTGTTCTGGCGGCCGATCCCAGCGCCACGCTCTGT > 1:7712279/1‑71 CAGGATCGCTGGGCGTCTTTCTTGCCGGAGGAACGGTTGTTCTGGCGGCCGATCCCAGCGCCACGCTCTGT > 1:2045622/1‑71 CAGGATCGCTGGGCGTCTTTCTTGCCGGAGGAACGGTTGTTCTGGCGGCCGATCCCAGCGCCACGCTCTG < 1:829037/70‑1 GAACAACCGTTCCTCCGGCAAGAAAGACGCCCAGCGATCCTGGCGAACTCATGGCGTAGTTATGAGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/626055‑625985‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccAGGATCGCTGGGCGTCTTTCTTGCCGGAGGAACGGTTGTTCTGGCGGCCGATCCCAGCGCCACGCTCTGT > AP009048/626015‑626084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |