| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 860799 | 69 (0.850) | 6 (0.080) | 5/88 | NT | 8.5% | coding (2230/2433 nt) | ybiW | predicted pyruvate formate lyase |
| ? | AP009048 | = 860811 | 68 (0.930) | coding (2218/2433 nt) | ybiW | predicted pyruvate formate lyase | |||||
AGCAGCGTTTCGCGGGAAACGATGTTGTACTGAATATGCCAGCCTTTATGCACTTCAAAGAAGGTACGCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/860726‑860799‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagAAACTGATGATCCTGCTGCGTACCTTCTTTGAAGTGCATAAAGGCTGGCATATTCAGTACAACATCGTTT < AP009048/860811‑860742 AGCAGCGTTTCGCGGGAAACGATGTTGTACTGAATATGCCAGCCTTTATGCACTTCAAAGAAGGTACGCAG < 1:1439914/71‑1 GCAGCGTTTCGCGGGAAACGATGTTGTACTGAATATGCCAGCCTTTATGCACTTCAAAGAAGGTACGCAGC < 1:6691549/71‑1 GCAGCGTTTCGCGGGAAACGATGTTGTACTGAATATGCCAGCCTTTATGCACTTCAAAGAAGGTACGCAGC < 1:4879194/71‑1 CAGCGTTTCGCGGGAAACGATGTTGTACTGAATATGCCAGCCTTTATGCACTTCAAAGAAGGTACGCAGC > 1:2667025/1‑70 GCGGGAAACGATGTTGTACTGAATATGCCAGCCTTTATGCACTTCAAAGAAGGTACGCAGCAGAAACTGAT > 1:7461863/1‑71 GGGAAACGATGTTGTACTGAATATGCCAGCCTTTATGCACTTCAAAGAAGGTACGCAGCA < 1:1175462/60‑1 GGGAAACGATGTTGTACTGAATATGCCAGCCTTTATGCACTTCAAAGAAGGTACGCAGCA < 1:6971098/60‑1 GGGAAACGATGTTGTACTGAATATGCCAGCCTTTATGCACTTCAAAGAAGGTACGCAGCA < 1:776710/60‑1 GGGAAACGATGTTGTACTCAATATGCCAGCCTTTATGCACTTCAAAGAAGGTACGCAGCA < 1:5596133/60‑1 GAAACGATGTTGTACTGAATATGCCAGCCTTTATGCACTTCAAAGAAGGTACGCAG < 1:7781940/56‑1 CGATGTTGTACTGAATATGCCAGCCTTTATGCACTTCAAAGAAGGTACGCAGCAGAAACTGATGATCCTGC < 1:605651/71‑1 CGATGTTGTACTGAATATGCCAGCCTTTATGCACTTCAAAGAAGGTACGCAGCAGAAACTGATGATCCTGC < 1:2342129/71‑1 TTGTACTGAATATGCCAGCCTTTATGCACTTCAAAGAAGGTACGCAGCAGAAACTGATGATCCTGCT < 1:1360213/67‑1 GTACTGAATATGCCAGCCTTTATGCACTTCAAAGAAGGTACGCAGCAGAAACTGATGATCCTGCTGC > 1:2028054/1‑67 CAAAGAAGGTACGCAGCAGAAACTGATGATCCTGCT > 1:2896875/1‑36 AGCAGAAACTGATGATCCTGCTGCGTACCTTCTTTGAAGTGCATAAAGGCTGGCATATTCAGTACAACATC < 1:5603606/71‑1 AGCAGAAACTGATGATCCTGCTGCGTACCTTCTTTGAAGTGCATAAAGGCTGGCATATTCAGTACAACATC < 1:6474264/71‑1 AGCAGAAACTGATGATCCTGCTGCGTACCTTCTTTGAAGTGCATAAAGGCTGGCATATTCAGTACAACATC < 1:703775/71‑1 AGCAGAAACTGATGATCCTGCTGCGTACCTTCTTT < 1:4159626/35‑1 GCAGAAACTGATGATCCTGCTGCGTACCTTCTTTGAAGTGCATAAAGGCTGGCATATTCAGTACAACATCG < 1:5024857/71‑1 CAGAAACTGATGATCCTGCTGCGTACCTTCTTTGAAGTGCAT < 1:3704731/42‑1 AGAAACTGATGATCCTGCTGCGTACCTTCTTTGAGGTGCATAAAGGC < 1:796222/47‑1 AGAAACTGATGATCCTGCTGCGTACCTTCTTTGAGGTGCATAAAGGC < 1:805640/47‑1 AGAAACTGATGATCCTGCTGCGTACCTTCTTTGAAGTTCATAAAGGCTGGCATATTCAGTACAACATCGTT < 1:7064094/71‑1 AGAAACTGATGATCCTGCTGCGTACCTTCTTTGAAGTGCATAAAGGCTGGC < 1:5587172/51‑1 GAAACTGATGATCCTGCTGCGTACCTTCTTTGAAGTGCATAAAGGCTGGCATATTCAGTACAACATCGTTT > 1:4346311/1‑71 GAAACTGATGATCCTGCTGCGTACCTTCTTTGAAGTGCA < 1:2811079/39‑1 GAAACTGATGATACTGCTGCGTACCTTCTTTGAAGTGCATAAAGGCTGGCATATTCAGTAAAACATCGTTT > 1:5085700/1‑71 AGCAGCGTTTCGCGGGAAACGATGTTGTACTGAATATGCCAGCCTTTATGCACTTCAAAGAAGGTACGCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/860726‑860799‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagAAACTGATGATCCTGCTGCGTACCTTCTTTGAAGTGCATAAAGGCTGGCATATTCAGTACAACATCGTTT < AP009048/860811‑860742 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |