| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 993402 | 75 (0.920) | 5 (0.070) | 3/88 | NT | 6.7% | coding (2359/2613 nt) | pepN | aminopeptidase N |
| ? | AP009048 | = 993418 | 73 (1.000) | coding (2375/2613 nt) | pepN | aminopeptidase N | |||||
GAGACGGTGCGCGGCCTGTTGCAGCATCGCTCATTTACCATGAGCAACCCGAACCGTATTCGTTCGTTGATTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/993330‑993402‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gattgCTGCCCGCAAACGCGCCAATCAACGAACGAATACGGTTCGGGTTGCTCATGGTAAATGAGCGATGCTGC < AP009048/993418‑993350 GAGACGGTGCGCGGCCTGTTGCAGCATCGCTCATTTACCATGAGCAACCCGAACCGTATTCGTTCGTTGAT > 1:7524254/1‑71GAGACGGTGCGCGGCCTGTTGCAGCATCGCTCATTTACCATGAGCAACCCGAACCGTATTCGTTCGTTGA < 1:6694231/70‑1 GACGGTGCGCGGCCTGTTGCAGCATCGCTCATTTACCATGAGCAACCCGAACCGTATTCGTTCGTTGATTG < 1:6716414/71‑1 GACGGTGCGCGGCCTGTTGCAGCATCGCTCATTTACCATGAGCAACCCGAACCGTATTCGTTCGTTGATTG < 1:5268129/71‑1 ACGGTGCGCGGCCTGTTGCAGCATCGCTCATTTACCATGAGCAACCCGAACCGTATTCGTTCGTTGATTG < 1:7150027/70‑1 ATGAGCAACCCGAACCGTATTCGTTCGTTGATTGCTGCCCGCAAACGCGCCAATC < 1:1110191/55‑1 ATGAGCAACCCGAACCGTATTCGTTCGTTGATTGCTGCCCGCAAACGCGCCAATC < 1:164509/55‑1 GAGCAACCCGAACCGTATTCGTTCGTTGATTGCTGCCCGCAAACGCGCTAATCAA > 1:107623/1‑55 GAACCGTATTCGTTCGTTGATTGCTGCCCGCAAACG > 1:2553310/1‑36 GAACCGTATTCGTTCGTTGATTGCTGCCCGCAAACG > 1:6929014/1‑36 GATTGCTGCCCGCAAACGCGCCAATCAACGCACGACTACGGTTCGGGTTGCTCATGGTAAATGAGCGATG > 1:1144884/1‑70 ATTGCTGCCCGCAAACGCGCCAATCAACGAACGAATACGGTTCGGGTTGCTCATGGTAAATGAGCGATGCT < 1:1343370/71‑1 ATTGCTGCCCGCAAACGCGCCAATCAACGAACGAATACGGTTCGGGTTGCTCATGGTAAATGAGCGATGCT > 1:2246791/1‑71 TTGCTGCCCGCAAACGCGCCAATCAACGAACGAATACGGTTCGGGTTGC < 1:2853326/49‑1 TTGCTGCCCGCAAACGCGCCAATCAACGAACGAATACGGTTCGGGTTGC < 1:5815741/49‑1 TGCTGCCCGCAAACGCGCCAATCAACGAACGAATACGGTTCGGGTTGCTCATGGTAAATGAGCGATGCTG > 1:1234759/1‑70 TGCTGCCCGCAAACGCGCCAATCAACGAACGAATACGGTTCGGGTTGCTCATGGTAAATGAGCGATGCTG > 1:3644735/1‑70 TGCTGCCCGCAAACGCGCCAATCAACGAACGAATACGGTTCGGGTTGC < 1:1820691/48‑1 TGCTGCCCGCAAACGCGCCAATCAACGAACGAATACGGTTCGGGTTCCTCATGGTAAATGAGCGATGCTG > 1:4742448/1‑70 GCTGCCCGCAAACGCGCCAATCAACGAACGAATACGGTTCGGGTTGCTCATGGTAAATGAGCGATGCTGC < 1:6908152/70‑1 GCTGCCCGCAAACGCGCCAATCAACGAACGAATACGGTTCGGGTTGCTCATGGTAAATGAGCGATGCTGC < 1:960907/70‑1 GCTGCCCGCAAACGCGCCAATCAACGAACGAATACGGTTCGGGTTGCTCATGGTAAATGAGCGATGCTGC < 1:3552601/70‑1 GCTGCCCGCAAACGCGCCAATCAACGAACGAATACGGTTCGGGTTGCTCATGGTAAATGAGCGATGCTGC < 1:3164089/70‑1 GCTGCCCGCAAACGCGCCAATCAACGAACGAATACGGTTCGGGTTGCTCATGGTAAATGAGCGATGCTGC < 1:1206718/70‑1 GCTGCCCGCAAACGCGCCAATCAACGAACGAATACGGTTCGGGTTGCT < 1:6245697/48‑1 GCTGCCCGCAAACGCGCCAATCAACGAACGAATACGGTTCGGGTTGCT < 1:5370023/48‑1 GCTGCCCGCAAACGCGCCAATCAACGAACGAATACGGTTCGGGTTGCT < 1:269930/48‑1 GCTGCCCGCAAACGCGCCAATCAACGAACGAATACGGTTCGGGTTGCT < 1:2226296/48‑1 GAGACGGTGCGCGGCCTGTTGCAGCATCGCTCATTTACCATGAGCAACCCGAACCGTATTCGTTCGTTGATTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/993330‑993402‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gattgCTGCCCGCAAACGCGCCAATCAACGAACGAATACGGTTCGGGTTGCTCATGGTAAATGAGCGATGCTGC < AP009048/993418‑993350 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |